Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000008903
NCBI Reference Sequence	NM_001078353.1
NCBI Reference Sequence	XM_018817835.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl001m20

Plate: R1CiGC08a22

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

26 results

Ci-Sna -3200/codon 15 REG00000051 [ regulatory_region (extended_promoter) ]

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily
Znf_C2H2_type	SMART	Zinc finger C2H2-type

GOSlim

49 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
Notch signaling pathway	Orthology	biological process
multicellular organism development	Orthology	biological process
sensory perception of sound	Orthology	biological process
cell migration	Orthology	biological process
kinase binding	Orthology	molecular function
negative regulation of apoptotic process	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
metal ion binding	Orthology	molecular function
negative regulation of canonical Wnt signaling pathway	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
cell differentiation	Orthology	biological process
anatomical structure formation involved in morphogenesis	Orthology	biological process
animal organ development	Orthology	biological process
transition metal ion binding	Orthology	molecular function
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
anatomical structure development	Orthology	biological process
cell development	Orthology	biological process
organelle organization	Orthology	biological process
cellular protein modification process	Orthology	biological process
intracellular signal transduction	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
cell-cell signaling	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
cellular response to organic substance	Orthology	biological process
negative regulation of cell proliferation	Orthology	biological process
cell division	Orthology	biological process

GO (Orthology)

60 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
nuclear chromatin	Hs	cellular component
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
osteoblast differentiation	Hs	biological process
mesoderm formation	Hs	biological process
epithelial to mesenchymal transition	Hs	biological process
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function
copper ion binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor complex	Hs	cellular component
pericentric heterochromatin	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
Notch signaling pathway	Hs	biological process
multicellular organism development	Hs	biological process
mesoderm development	Hs	biological process
sensory perception of sound	Hs	biological process
response to radiation	Hs	biological process
positive regulation of epithelial to mesenchymal transition	Hs	biological process
neural crest cell development	Hs	biological process
cell migration	Hs	biological process
kinase binding	Hs	molecular function
positive regulation of cell migration	Hs	biological process
positive regulation of histone acetylation	Hs	biological process
negative regulation of catenin import into nucleus	Hs	biological process
negative regulation of apoptotic process	Hs	biological process
pigmentation	Hs	biological process
negative regulation of DNA damage response, signal transduction by p53 class mediator	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
positive regulation of fat cell differentiation	Hs	biological process
regulation of osteoblast differentiation	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
metal ion binding	Hs	molecular function
palate development	Hs	biological process
canonical Wnt signaling pathway	Hs	biological process
epithelium development	Hs	biological process
cartilage morphogenesis	Hs	biological process
left/right pattern formation	Hs	biological process
heterochromatin organization	Hs	biological process
cellular response to epidermal growth factor stimulus	Hs	biological process
cellular response to ionizing radiation	Hs	biological process
negative regulation of canonical Wnt signaling pathway	Hs	biological process
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage	Hs	biological process
negative regulation of stem cell proliferation	Hs	biological process
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand	Hs	biological process

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	197	4.34e-59
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	187	8.33e-55
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	187	8.33e-55
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	197	4.34e-59
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	187	8.33e-55
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	197	4.34e-59
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	187	8.33e-55
nucleic acid binding	Hs	molecular function	197	4.34e-59
DNA binding	Hs	molecular function	197	4.34e-59
chromatin binding	Hs	molecular function	197	4.34e-59
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	187	8.33e-55
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	197	4.34e-59
copper ion binding	Hs	molecular function	187	8.33e-55
protein binding	Hs	molecular function	197	4.34e-59
nucleus	Hs	cellular component	197	4.34e-59
nucleoplasm	Hs	cellular component	197	4.34e-59
transcription factor complex	Hs	cellular component	187	8.33e-55
pericentric heterochromatin	Hs	cellular component	171	3.85e-49
cytoplasm	Hs	cellular component	197	4.34e-59
cytosol	Hs	cellular component	171	3.85e-49
kinase binding	Hs	molecular function	171	3.85e-49
sequence-specific DNA binding	Hs	molecular function	197	4.34e-59
metal ion binding	Hs	molecular function	197	4.34e-59

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	3.5E-5

Gene Card

Best human hits

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Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences