Gene Card
Best human hits
TPM1; TPM3; TPM4
Unique Gene ID
Cirobu.g00005858
Gene Model ID
KH2012:KH.C3.661
Location
KhC3:4367583..4370263
Transcript Models and Sequences
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000004282 |
| NCBI Reference Sequence | XM_002122229.4 |
Gateway full ORF
2 results
cien110000
Plate: VES87_M14
cien152582
Plate: VES93_O24
Gene collection 1 (N. Satoh)
1 result
citb010p10
Plate: R1CiGC30o11
Regulatory Regions
13 results
- Ci-tropomyosin 3 -2102/82 REG00000473 [ regulatory_region (extended_promoter) ]
- Ci-tropomyosin 3 -953/82 REG00000491 [ regulatory_region (extended_promoter) ]
- Ci-tropomyosin 3 -113/82 REG00000492 [ regulatory_region (extended_promoter) ]
- Ci-tropomyosin 3 -102/82 REG00000493 [ regulatory_region (extended_promoter) ]
- Ci-tropomyosin 3 -89/82 REG00000494 [ inactive_region ]
- Ci-tropomyosin 3 -102/82 Tbx6-2 mutated REG00000502 [ inactive_region ]
- Ci-tropomyosin 3 -102/82 CRE-1 mutated REG00000503 [ inactive_region ]
- Ci-tropomyosin 3 -102/82 CRE-2 mutated REG00000504 [ regulatory_region (extended_promoter) ]
- Ci-tropomyosin 3 -102/82 Tbx6-3 mutated REG00000505 [ regulatory_region (extended_promoter) ]
- Ci-tropomyosin 3 -102/82 Tbx6-2>MyoD REG00000506 [ regulatory_region (extended_promoter) ]
- Ci-tropomyosin 3 -102/82 REG00000493 [ regulatory_region (extended_promoter) ]
- Ci-tropomyosin 3 -953/82 Tbx6-2 mutated REG00000501 [ inactive_region ]
- Ci-tropomyosin 3 -500/32 REG00000635 [ regulatory_region (extended_promoter) ]
- Ci-tropomyosin 3 -113/82 REG00000492 [ regulatory_region (extended_promoter) ]
- Ci-tropomyosin 3 -2102/-103 REG00000510 [ inactive_region ]
- Ci-tropomyosin 3 -953/82 REG00000491 [ regulatory_region (extended_promoter) ]
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Click here to see the tree inference method
InterPro
2 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Tropomyosin | PRINTS | Tropomyosin |
| Tropomyosin | Pfam | Tropomyosin |
GOSlim
28 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| actin binding | Blast | molecular function |
| calcium ion binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| cytoplasm | Blast | cellular component |
| cytosol | Blast | cellular component |
| cytoskeleton | Blast | cellular component |
| focal adhesion | Blast | cellular component |
| cytoskeletal protein binding | Blast | molecular function |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| identical protein binding | Blast | molecular function |
| protein homodimerization activity | Blast | molecular function |
| metal ion binding | Blast | molecular function |
| protein heterodimerization activity | Blast | molecular function |
| actin filament binding | Blast | molecular function |
| extracellular exosome | Blast | cellular component |
| cytoskeletal part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| organelle organization | Blast | biological process |
| structural molecule activity | Blast | molecular function |
| cytoplasmic part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| organelle part | Blast | cellular component |
| cell periphery | Blast | cellular component |
| cell projection | Blast | cellular component |
| plasma membrane region | Blast | cellular component |
| cell projection membrane | Blast | cellular component |
| cell leading edge | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
29 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| stress fiber | Hs | cellular component | 230 | 4.33e-75 |
| podosome | Hs | cellular component | 229 | 1.78e-74 |
| actin binding | Hs | molecular function | 230 | 4.33e-75 |
| structural constituent of cytoskeleton | Hs | molecular function | 216 | 6.67e-69 |
| calcium ion binding | Hs | molecular function | 229 | 1.78e-74 |
| protein binding | Hs | molecular function | 230 | 4.33e-75 |
| cytoplasm | Hs | cellular component | 230 | 4.33e-75 |
| cytosol | Hs | cellular component | 230 | 4.33e-75 |
| cytoskeleton | Hs | cellular component | 230 | 4.33e-75 |
| muscle thin filament tropomyosin | Hs | cellular component | 230 | 4.33e-75 |
| actin filament | Hs | cellular component | 230 | 4.33e-75 |
| focal adhesion | Hs | cellular component | 229 | 1.78e-74 |
| cytoskeletal protein binding | Hs | molecular function | 216 | 6.67e-69 |
| structural constituent of muscle | Hs | molecular function | 230 | 4.33e-75 |
| actin cytoskeleton | Hs | cellular component | 230 | 4.33e-75 |
| membrane | Hs | cellular component | 229 | 1.78e-74 |
| integral component of membrane | Hs | cellular component | 216 | 6.67e-69 |
| myofibril | Hs | cellular component | 216 | 6.67e-69 |
| sarcomere | Hs | cellular component | 216 | 6.67e-69 |
| cortical cytoskeleton | Hs | cellular component | 229 | 1.78e-74 |
| filamentous actin | Hs | cellular component | 229 | 1.78e-74 |
| bleb | Hs | cellular component | 216 | 6.67e-69 |
| ruffle membrane | Hs | cellular component | 216 | 6.67e-69 |
| identical protein binding | Hs | molecular function | 229 | 1.78e-74 |
| protein homodimerization activity | Hs | molecular function | 229 | 1.78e-74 |
| metal ion binding | Hs | molecular function | 229 | 1.78e-74 |
| protein heterodimerization activity | Hs | molecular function | 229 | 1.78e-74 |
| actin filament binding | Hs | molecular function | 230 | 4.33e-75 |
| extracellular exosome | Hs | cellular component | 230 | 4.33e-75 |
| GO Term | Analysis | Type | e-value |
|---|
