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GENE CARD

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  1. Gene 'KH2012:KH.C3.618'

Gene Card

Best human hits

ADAP1; ADAP2; SMAP2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005812

Gene Model ID

KH2012:KH.C3.618

Location

KhC3:2347191..2352305

Transcript Models and Sequences

  KH2012:KH.C3.618.v1.A.SL1-1
KH2012:KH.C3.618.v1.A.SL2-1
KH2012:KH.C3.618.v2.A.SL1-2
KH2012:KH.C3.618.v2.A.SL2-2

External Database Gene Card

External database links

4 results

Database Gene ID
ENSEMBL ENSCING00000012778
NCBI Reference Sequence NM_001078438.1
NCBI Reference Sequence XM_009859658.2
NCBI Reference Sequence XM_018817836.1
Collections

Gateway full ORF

2 results

cima893468

Plate: VES71_M07

cien178940

Plate: VES97_A22

Gene collection 1 (N. Satoh)

1 result

cieg030d14

Plate: R1CiGC20o14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
PH-like_dom_sf Gene3D PH-like domain superfamily
PH_domain SMART Pleckstrin homology domain
ArfGAP_dom ProSiteProfiles Arf GTPase activating protein
PH_domain ProSiteProfiles Pleckstrin homology domain
ARFGAP/RecO SUPERFAMILY ARFGAP/RecO-like zinc finger
PH_domain Pfam Pleckstrin homology domain
ArfGAP_dom Pfam Arf GTPase activating protein
PH2_ADAP CDD ADAP, PH domain 2
PH1_ADAP CDD ADAP, PH domain 1
ArfGAP_dom PRINTS Arf GTPase activating protein
ArfGAP_dom SMART Arf GTPase activating protein
ArfGAP_dom_sf Gene3D ArfGAP domain superfamily

GOSlim

12 results

GO Term Annotation Origin Type
GTPase activator activity Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
mitochondrial envelope Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
positive regulation of GTPase activity InterProScan biological process
metal ion binding Blast molecular function
anion binding Blast molecular function
small molecule binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
GTPase activator activity Hs molecular function 339 5.20e-115
protein binding Hs molecular function 339 5.20e-115
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function 320 2.46e-107
phosphatidylinositol-3,4,5-trisphosphate binding Hs molecular function 339 5.20e-115
nucleus Hs cellular component 339 5.20e-115
cytoplasm Hs cellular component 339 5.20e-115
mitochondrial envelope Hs cellular component 320 2.46e-107
cytosol Hs cellular component 339 5.20e-115
plasma membrane Hs cellular component 339 5.20e-115
membrane Hs cellular component 320 2.46e-107
protein binding, bridging Hs molecular function 320 2.46e-107
phosphatidylinositol-3,4-bisphosphate binding Hs molecular function 320 2.46e-107
inositol 1,3,4,5 tetrakisphosphate binding Hs molecular function 339 5.20e-115
metal ion binding Hs molecular function 339 5.20e-115
phosphatidylinositol bisphosphate binding Hs molecular function 339 5.20e-115

GO (InterProScan)

3 results

GO Term Analysis Type e-value
GTPase activator activity CDD molecular function 2.89025E-59
positive regulation of GTPase activity CDD biological process 2.89025E-59
phosphatidylinositol bisphosphate binding CDD molecular function 2.89025E-59

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