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Gene Card

Best human hits

WDR45; WDR45B; WIPI1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005796

Gene Model ID

KH2012:KH.C3.602

Location

KhC3:3157452..3158988

Transcript Models and Sequences

  KH2012:KH.C3.602.v1.C.SL1-1
KH2012:KH.C3.602.v1.C.SL2-1
KH2012:KH.C3.602.v1.C.SL3-1
KH2012:KH.C3.602.v1.C.SL4-1
KH2012:KH.C3.602.v1.C.SL5-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000019092
Collections

Gateway full ORF

2 results

cien94518

Plate: VES85_O04

cima865919

Plate: VES65_E20

Gene collection 1 (N. Satoh)

1 result

cieg011p14

Plate: R1CiGC17o06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat Pfam WD40 repeat
WD40_repeat SMART WD40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily

GOSlim

41 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
receptor binding Blast molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
endosome Orthology cellular component
Golgi apparatus Blast cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
membrane Orthology cellular component
integral component of membrane Orthology cellular component
cytoplasmic vesicle Blast cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
plasma membrane Orthology cellular component
protein transport Orthology biological process
positive regulation of apoptotic process Orthology biological process
extracellular exosome Orthology cellular component
organelle organization Orthology biological process
cellular protein modification process Orthology biological process
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
membrane part Orthology cellular component
anion binding Orthology molecular function
cytoplasmic part Orthology cellular component
ubiquitin-like protein transferase activity Orthology molecular function
ligase activity Orthology molecular function
cellular protein localization Orthology biological process
peptidase activity, acting on L-amino acid peptides Orthology molecular function
organic substance transport Orthology biological process
ion transport Orthology biological process
transmembrane transport Orthology biological process
intracellular signal transduction Orthology biological process
cellular response to stress Orthology biological process
positive regulation of signal transduction Orthology biological process
protein phosphorylation Orthology biological process
endopeptidase activity Orthology molecular function
positive regulation of hydrolase activity Orthology biological process
vacuolar membrane Blast cellular component
Golgi apparatus part Blast cellular component
transcription factor binding Blast molecular function

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
autophagy of mitochondrion Hs biological process
protein binding Hs molecular function
cytoplasm Hs cellular component
endosome Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
protein lipidation Hs biological process
autophagy Hs biological process
endosome membrane Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
extrinsic component of membrane Hs cellular component
phosphatidylinositol-3-phosphate binding Hs molecular function
pre-autophagosomal structure membrane Hs cellular component
protein localization to pre-autophagosomal structure Hs biological process
autophagy of nucleus Hs biological process
phosphatidylinositol-3,5-bisphosphate binding Hs molecular function
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
plasma membrane Hs cellular component
protein transport Hs biological process
L-glutamate transport Hs biological process
positive regulation of stress-activated MAPK cascade Hs biological process
positive regulation of apoptotic process Hs biological process
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process Hs biological process
extracellular exosome Hs cellular component

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 108 2.34e-26
pre-autophagosomal structure Hs cellular component 108 2.34e-26
autophagosome membrane Hs cellular component 108 2.34e-26
receptor binding Hs molecular function 108 2.34e-26
protein binding Hs molecular function 430 1.88e-151
cytoplasm Hs cellular component 108 2.34e-26
endosome Hs cellular component 108 2.34e-26
Golgi apparatus Hs cellular component 108 2.34e-26
trans-Golgi network Hs cellular component 108 2.34e-26
cytosol Hs cellular component 430 1.88e-151
cytoskeleton Hs cellular component 108 2.34e-26
endosome membrane Hs cellular component 108 2.34e-26
membrane Hs cellular component 430 1.88e-151
integral component of membrane Hs cellular component 430 1.88e-151
extrinsic component of membrane Hs cellular component 430 1.88e-151
clathrin-coated vesicle Hs cellular component 108 2.34e-26
estrogen receptor binding Hs molecular function 108 2.34e-26
cytoplasmic vesicle Hs cellular component 108 2.34e-26
phosphatidylinositol-3-phosphate binding Hs molecular function 430 1.88e-151
pre-autophagosomal structure membrane Hs cellular component 430 1.88e-151
androgen receptor binding Hs molecular function 108 2.34e-26
phosphatidylinositol-3,5-bisphosphate binding Hs molecular function 430 1.88e-151

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 6.72E-28

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