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Gene Card

Best human hits

EFNA1; EFNB1; EFNB3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005705

Gene Model ID

KH2012:KH.C3.52

Location

KhC3:2792861..2800673

Transcript Models and Sequences

  KH2012:KH.C3.52.v1.A.nonSL1-1
KH2012:KH.C3.52.v1.A.SL2-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000005717
NCBI Reference Sequence NM_001078225.1
NCBI Reference Sequence XM_018817831.1
Collections

Gateway full ORF

2 results

cima881415

Plate: VES68_O23

cima8110319

Plate: VES73_C23

Gene collection 1 (N. Satoh)

1 result

ciad074h16

Plate: R1CiGC07i06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

1 results

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Ephrin-A_Ecto CDD Ephrin-A ectodomain
Ephrin_RBD PRINTS Ephrin receptor-binding domain
Ephrin PANTHER Ephrin
Cupredoxin SUPERFAMILY Cupredoxin
Ephrin_RBD ProDom Ephrin receptor-binding domain
Ephrin_RBD Pfam Ephrin receptor-binding domain
Ephrin_RBD ProSiteProfiles Ephrin receptor-binding domain
Cupredoxin Gene3D Cupredoxin

GOSlim

62 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
angiogenesis Orthology biological process
receptor binding Orthology molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
nucleus Blast cellular component
cytoplasm Blast cellular component
plasma membrane Orthology cellular component
integral component of plasma membrane Orthology cellular component
cell adhesion Orthology biological process
cell-cell signaling Orthology biological process
multicellular organism development Orthology biological process
nervous system development Orthology biological process
axon guidance Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
cell migration Orthology biological process
cell differentiation Orthology biological process
neuron differentiation Orthology biological process
membrane raft Orthology cellular component
synapse Orthology cellular component
extracellular exosome Orthology cellular component
adherens junction Orthology cellular component
regulation of GTPase activity Orthology biological process
cell periphery Orthology cellular component
protein phosphorylation Orthology biological process
cell surface receptor signaling pathway Orthology biological process
protein kinase activity Orthology molecular function
transmembrane signaling receptor activity Orthology molecular function
animal organ development Orthology biological process
anatomical structure formation involved in morphogenesis Orthology biological process
intrinsic component of membrane Orthology cellular component
cell morphogenesis involved in differentiation Orthology biological process
intracellular signal transduction Orthology biological process
negative regulation of signal transduction Orthology biological process
positive regulation of signal transduction Orthology biological process
intrinsic component of plasma membrane Orthology cellular component
regulation of cellular metabolic process Orthology biological process
axonogenesis Orthology biological process
positive regulation of catalytic activity Orthology biological process
proteolysis Orthology biological process
extracellular region part Orthology cellular component
plasma membrane region Orthology cellular component
brain development Orthology biological process
cell morphogenesis Orthology biological process
enzyme activator activity Orthology molecular function
protein kinase binding Orthology molecular function
signaling receptor activity Orthology molecular function
regulation of signal transduction Orthology biological process
immune system process Orthology biological process
cell surface Orthology cellular component
organelle organization Orthology biological process
neuronal cell body Orthology cellular component
molecular function regulator Orthology molecular function
chemotaxis Orthology biological process
cell development Orthology biological process
cellular response to organic substance Orthology biological process
protein transport Orthology biological process
regulation of signaling Orthology biological process
microtubule-based process Orthology biological process
response to lipid Orthology biological process
binding Blast molecular function

GO (Orthology)

67 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
angiogenesis Hs biological process
positive regulation of protein phosphorylation Hs biological process
transmembrane-ephrin receptor activity Hs molecular function
receptor binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
plasma membrane Hs cellular component
integral component of plasma membrane Hs cellular component
cell-cell signaling Hs biological process
multicellular organism development Hs biological process
nervous system development Hs biological process
axon guidance Hs biological process
negative regulation of epithelial to mesenchymal transition Hs biological process
notochord formation Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
cell migration Hs biological process
cell differentiation Hs biological process
neuron differentiation Hs biological process
anchored component of membrane Hs cellular component
regulation of cell adhesion mediated by integrin Hs biological process
substrate adhesion-dependent cell spreading Hs biological process
negative regulation of MAPK cascade Hs biological process
positive regulation of MAPK cascade Hs biological process
regulation of blood vessel endothelial cell migration Hs biological process
regulation of angiogenesis Hs biological process
anchored component of plasma membrane Hs cellular component
ephrin receptor binding Hs molecular function
ephrin receptor signaling pathway Hs biological process
regulation of peptidyl-tyrosine phosphorylation Hs biological process
positive regulation of peptidyl-tyrosine phosphorylation Hs biological process
regulation of axonogenesis Hs biological process
protein stabilization Hs biological process
positive regulation of protein tyrosine kinase activity Hs biological process
extracellular exosome Hs cellular component
negative regulation of proteolysis involved in cellular protein catabolic process Hs biological process
neurotrophin TRKA receptor binding Hs molecular function
neurotrophin TRKB receptor binding Hs molecular function
neurotrophin TRKC receptor binding Hs molecular function
basement membrane Hs cellular component
caveola Hs cellular component
adherens junction Hs cellular component
activation of transmembrane receptor protein tyrosine kinase activity Hs biological process
negative regulation of angiogenesis Hs biological process
olfactory bulb development Hs biological process
regulation of cell-cell adhesion Hs biological process
regulation of cell morphogenesis Hs biological process
transmembrane receptor protein tyrosine kinase activator activity Hs molecular function
osteoclast differentiation Hs biological process
retinal ganglion cell axon guidance Hs biological process
anchored component of external side of plasma membrane Hs cellular component
neuromuscular junction Hs cellular component
regulation of actin cytoskeleton organization Hs biological process
regulation of GTPase activity Hs biological process
perikaryon Hs cellular component
chemorepellent activity Hs molecular function
regulation of neuron differentiation Hs biological process
bone remodeling Hs biological process
collateral sprouting Hs biological process
negative chemotaxis Hs biological process
positive regulation of synapse assembly Hs biological process
regulation of insulin secretion involved in cellular response to glucose stimulus Hs biological process
regulation of microtubule cytoskeleton organization Hs biological process
cell periphery Hs cellular component
negative regulation of substrate adhesion-dependent cell spreading Hs biological process
cellular response to forskolin Hs biological process

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
virus receptor activity Hs molecular function 63.2 1.79e-11
transmembrane-ephrin receptor activity Hs molecular function 63.2 1.79e-11
receptor binding Hs molecular function 61.2 2.72e-11
protein binding Hs molecular function 67.0 8.18e-13
extracellular region Hs cellular component 61.2 2.72e-11
nucleus Hs cellular component 67.0 8.18e-13
cytoplasm Hs cellular component 67.0 8.18e-13
plasma membrane Hs cellular component 67.0 8.18e-13
integral component of plasma membrane Hs cellular component 67.0 8.18e-13
membrane Hs cellular component 67.0 8.18e-13
integral component of membrane Hs cellular component 67.0 8.18e-13
anchored component of membrane Hs cellular component 61.2 2.72e-11
membrane raft Hs cellular component 67.0 8.18e-13
synapse Hs cellular component 67.0 8.18e-13
anchored component of plasma membrane Hs cellular component 61.2 2.72e-11
ephrin receptor binding Hs molecular function 67.0 8.18e-13
extracellular exosome Hs cellular component 67.0 8.18e-13

GO (InterProScan)

3 results

GO Term Analysis Type e-value
membrane Pfam cellular component 3.5E-37
ephrin receptor binding CDD molecular function 2.97716E-55
ephrin receptor signaling pathway CDD biological process 2.97716E-55

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