Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000004333
NCBI Reference Sequence	NM_001078432.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cign071l12

Plate: R1CiGC42n08

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term	Analysis	Definition
FBX11/DRE-1	PANTHER	F-box only protein 11
Pectin_lyase_fold/virulence	SUPERFAMILY	Pectin lyase fold/virulence factor
F-box-like_dom_sf	SUPERFAMILY	F-box-like domain superfamily
F-box_dom	ProSiteProfiles	F-box domain
PbH1	SMART	Parallel beta-helix repeat
F-box_dom	Pfam	F-box domain
Pectin_lyas_fold	Gene3D	Pectin lyase fold
Znf_UBR	ProSiteProfiles	Zinc finger, UBR-type
Para_beta_helix_rpt-2	TIGRFAM	Parallel beta-helix repeat-2
Znf_UBR	Pfam	Zinc finger, UBR-type
Znf_UBR	SMART	Zinc finger, UBR-type
Carb-bd_sugar_hydrolysis-dom	SMART	Carbohydrate-binding/sugar hydrolysis domain
F-box_dom	SMART	F-box domain

GOSlim

30 results

GO Term	Annotation Origin	Type
protein polyubiquitination	Orthology	biological process
ubiquitin-protein transferase activity	Orthology	molecular function
binding	Blast	molecular function
protein binding	Orthology	molecular function
calmodulin binding	Blast	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
centrosome	Blast	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Blast	cellular component
cellular protein modification process	Orthology	biological process
sensory perception of sound	Orthology	biological process
zinc ion binding	Orthology	molecular function
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
protein ubiquitination	Orthology	biological process
transferase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
proteolysis	Orthology	biological process
whole membrane	Blast	cellular component
intracellular organelle part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
bounding membrane of organelle	Blast	cellular component

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ubiquitin ligase complex	Hs	cellular component
protein polyubiquitination	Hs	biological process
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
chromosome	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cellular protein modification process	Hs	biological process
ubiquitin-dependent protein catabolic process	Hs	biological process
sensory perception of sound	Hs	biological process
zinc ion binding	Hs	molecular function
protein-arginine N-methyltransferase activity	Hs	molecular function
protein ubiquitination	Hs	biological process
peptidyl-arginine N-methylation	Hs	biological process
post-translational protein modification	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin ligase complex	Hs	cellular component	1233	0.0
ubiquitin-protein transferase activity	Hs	molecular function	1233	0.0
binding	Hs	molecular function	60.8	3.59e-09
protein binding	Hs	molecular function	1233	0.0
calmodulin binding	Hs	molecular function	60.8	3.59e-09
nucleus	Hs	cellular component	1233	0.0
nucleoplasm	Hs	cellular component	60.8	3.59e-09
chromosome	Hs	cellular component	1233	0.0
nucleolus	Hs	cellular component	1233	0.0
cytoplasm	Hs	cellular component	1233	0.0
centrosome	Hs	cellular component	60.8	3.59e-09
cytosol	Hs	cellular component	1233	0.0
cytoskeleton	Hs	cellular component	60.8	3.59e-09
plasma membrane	Hs	cellular component	60.8	3.59e-09
zinc ion binding	Hs	molecular function	1233	0.0
membrane	Hs	cellular component	60.8	3.59e-09
integral component of membrane	Hs	cellular component	60.8	3.59e-09
protein-arginine N-methyltransferase activity	Hs	molecular function	1233	0.0
transferase activity	Hs	molecular function	60.8	3.59e-09
specific granule membrane	Hs	cellular component	60.8	3.59e-09
metal ion binding	Hs	molecular function	1233	0.0
tertiary granule membrane	Hs	cellular component	60.8	3.59e-09
ficolin-1-rich granule membrane	Hs	cellular component	60.8	3.59e-09

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
ubiquitin ligase complex	PANTHER	cellular component	0.0
protein binding	SUPERFAMILY	molecular function	9.81E-19
zinc ion binding	Pfam	molecular function	4.8E-7
protein ubiquitination	PANTHER	biological process	0.0

Gene Card

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