Aniseed - Gene card

Gene 'KH2012:KH.C3.382'

Gene Card

Best human hits

KIN

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005558

Gene Model ID

KH2012:KH.C3.382

Location

KhC3:5604607..5606119

Transcript Models and Sequences

KH2012:KH.C3.382.v1.A.SL1-1
KH2012:KH.C3.382.v1.A.SL2-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000024731

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad039h11

Plate: R1CiGC04g14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily
Rib_L2_dom2	Gene3D	Ribosomal protein L2, domain 2
KIN17_WH-like_sf	Gene3D	KIN17, WH-like domain superfamily
KIN17-like	PANTHER	KIN17-like protein
DNA/RNA-bd_Kin17_cons_domain	Pfam	DNA/RNA-binding protein Kin17, conserved domain
DNA/RNA-bd_Kin17_cons_domain	SMART	DNA/RNA-binding protein Kin17, conserved domain

GOSlim

17 results

GO Term	Annotation Origin	Type
DNA binding	Orthology	molecular function
double-stranded DNA binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
DNA replication	Orthology	biological process
DNA repair	Orthology	biological process
mRNA processing	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
macromolecular complex	Orthology	cellular component
intracellular membrane-bounded organelle	Orthology	cellular component
metal ion binding	Orthology	molecular function
DNA metabolic process	Orthology	biological process
cellular protein modification process	Orthology	biological process
nuclear lumen	Orthology	cellular component

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
DNA binding	Hs	molecular function
double-stranded DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
DNA replication	Hs	biological process
DNA repair	Hs	biological process
DNA recombination	Hs	biological process
mRNA processing	Hs	biological process
protein methylation	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
viral process	Hs	biological process
nuclear matrix	Hs	cellular component
macromolecular complex	Hs	cellular component
intracellular membrane-bounded organelle	Hs	cellular component
metal ion binding	Hs	molecular function

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
DNA binding	Hs	molecular function	453	2.09e-159
double-stranded DNA binding	Hs	molecular function	453	2.09e-159
RNA binding	Hs	molecular function	453	2.09e-159
protein binding	Hs	molecular function	453	2.09e-159
nucleus	Hs	cellular component	453	2.09e-159
nucleoplasm	Hs	cellular component	453	2.09e-159
cytoplasm	Hs	cellular component	453	2.09e-159
nuclear matrix	Hs	cellular component	453	2.09e-159
macromolecular complex	Hs	cellular component	453	2.09e-159
intracellular membrane-bounded organelle	Hs	cellular component	453	2.09e-159
metal ion binding	Hs	molecular function	453	2.09e-159

GO (InterProScan)