Aniseed - Gene card

Gene Card

Best human hits

SLC6A18; SLC6A19; SLC6A20

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005447

Gene Model ID

KH2012:KH.C3.28

Location

KhC3:3549232..3556641

Transcript Models and Sequences

KH2012:KH.C3.28.v1.C.ND1-1
KH2012:KH.C3.28.v1.C.SL2-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000020950

Collections

Gateway full ORF

3 results

Gene collection 1 (N. Satoh)

1 result

ciad043i14

Plate: R1CiGC04p11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Na/ntran_symport	ProSitePatterns	Sodium:neurotransmitter symporter
Na/ntran_symport	ProSiteProfiles	Sodium:neurotransmitter symporter
Na/ntran_symport	Pfam	Sodium:neurotransmitter symporter
Na/ntran_symport	PRINTS	Sodium:neurotransmitter symporter
Na/ntran_symport	PANTHER	Sodium:neurotransmitter symporter
SNS_sf	SUPERFAMILY	Sodium:neurotransmitter symporter superfamily

GOSlim

13 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
plasma membrane	Orthology	cellular component
integral component of plasma membrane	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
apical plasma membrane	Orthology	cellular component
brush border membrane	Orthology	cellular component
transmembrane transport	Orthology	biological process
extracellular exosome	Blast	cellular component
sodium ion transport	Orthology	biological process
organic substance transport	Orthology	biological process
ion transport	Orthology	biological process
cation transport	Orthology	biological process

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
neurotransmitter:sodium symporter activity	Hs	molecular function
protein binding	Hs	molecular function
plasma membrane	Hs	cellular component
integral component of plasma membrane	Hs	cellular component
neurotransmitter transport	Hs	biological process
amino acid transport	Hs	biological process
amino acid transmembrane transporter activity	Hs	molecular function
symporter activity	Hs	molecular function
glycine transport	Hs	biological process
proline transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
apical plasma membrane	Hs	cellular component
brush border membrane	Hs	cellular component
transmembrane transport	Hs	biological process

GO (Blast)