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GENE CARD

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Gene Card

Best human hits

PNO1

Unique Gene ID

Cirobu.g00005374

Gene Model ID

KH2012:KH.C3.211

Location

KhC3:2743622..2744746

External Database Gene Card

External database links

2 results

Collections

Gateway full ORF

2 results

cima829051

Plate: VES61_K14

cima829154

Plate: VES61_I14

Gene collection 1 (N. Satoh)

1 result

cicl007o01

Plate: R1CiGC09o03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
KH_dom_type_1_sf Gene3D K Homology domain, type 1 superfamily
KH_dom SMART K Homology domain
KH_dom_type_1_sf SUPERFAMILY K Homology domain, type 1 superfamily

GOSlim

7 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
RNA binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Orthology cellular component
cytosol Orthology cellular component
RNA processing Orthology biological process

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytosol Hs cellular component
rRNA processing Hs biological process

GO (Blast)

6 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 334 3.41e-117
RNA binding Hs molecular function 334 3.41e-117
nucleus Hs cellular component 334 3.41e-117
nucleoplasm Hs cellular component 334 3.41e-117
nucleolus Hs cellular component 334 3.41e-117
cytosol Hs cellular component 334 3.41e-117

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.0018
RNA binding Gene3D molecular function 1.5E-26