Gene Card
Best human hits
FOXF1; FOXF2; FOXL1
Unique Gene ID
Cirobu.g00005328
Gene Model ID
KH2012:KH.C3.170
Location
KhC3:3589768..3597469
Transcript Models and Sequences
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000009387 |
| NCBI Reference Sequence | NM_001078242.1 |
Gene collection 1 (N. Satoh)
1 result
cicl007c02
Plate: R1CiGC09g03
Regulatory Regions
12 results
- FoxF -2989/64 REG00000192 [ regulatory_region (extended_promoter) ]
- FoxF -1072/-777 REG00000193 [ regulatory_region (enhancer) ]
- FoxF -991/-777 REG00000197 [ regulatory_region (enhancer) ]
- FoxF -1072/-777 delta E box REG00000200 [ regulatory_region (enhancer) ]
- FoxF -1072/-777 EtsA mutated REG00000202 [ regulatory_region (enhancer) ]
- FoxF -1072/-777 EtsB mutated REG00000203 [ regulatory_region (enhancer) ]
- FoxF -1072/-777 EtsC mutated REG00000204 [ regulatory_region (enhancer) ]
- FoxF -1072/-777 EtsA,B mutated REG00000205 [ regulatory_region (enhancer) ]
- FoxF -781/64 REG00000196 [ regulatory_region (extended_promoter) ]
- FoxF -2989/64 Delta E-Box REG00000198 [ regulatory_region (extended_promoter) ]
- FoxF -1072/-777 REG00000193 [ regulatory_region (enhancer) ]
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Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Fork_head_dom | CDD | Fork head domain |
| Fork_head_dom | SMART | Fork head domain |
| WH_DNA-bd_sf | SUPERFAMILY | Winged helix DNA-binding domain superfamily |
| TF_fork_head_CS_1 | ProSitePatterns | Fork head domain conserved site1 |
| WH-like_DNA-bd_sf | Gene3D | Winged helix-like DNA-binding domain superfamily |
| Fork_head_dom | Pfam | Fork head domain |
| TF_fork_head_CS_2 | ProSitePatterns | Fork head domain conserved site 2 |
| Fork_head_dom | ProSiteProfiles | Fork head domain |
| Fork_head_dom | PRINTS | Fork head domain |
GOSlim
12 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II regulatory region sequence-specific DNA binding | Blast | molecular function |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| regulation of transcription, DNA-templated | InterProScan | biological process |
| transcription factor binding | Blast | molecular function |
| sequence-specific DNA binding | Blast | molecular function |
| transcription regulatory region DNA binding | Blast | molecular function |
| intracellular part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
12 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II regulatory region sequence-specific DNA binding | Hs | molecular function | 204 | 1.82e-59 |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 204 | 1.82e-59 |
| transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | Hs | molecular function | 204 | 1.82e-59 |
| DNA binding | Hs | molecular function | 204 | 1.82e-59 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 204 | 1.82e-59 |
| transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding | Hs | molecular function | 204 | 1.82e-59 |
| nucleus | Hs | cellular component | 204 | 1.82e-59 |
| transcription factor complex | Hs | cellular component | 204 | 1.82e-59 |
| transcription factor binding | Hs | molecular function | 204 | 1.82e-59 |
| DNA binding, bending | Hs | molecular function | 139 | 2.00e-36 |
| sequence-specific DNA binding | Hs | molecular function | 204 | 1.82e-59 |
| transcription regulatory region DNA binding | Hs | molecular function | 194 | 1.26e-56 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| transcription factor activity, sequence-specific DNA binding | SMART | molecular function | 3.3E-57 |
| regulation of transcription, DNA-templated | SMART | biological process | 3.3E-57 |
| sequence-specific DNA binding | SMART | molecular function | 3.3E-57 |
