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GENE CARD

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  1. Gene 'KH2012:KH.C3.138'

Gene Card

Best human hits

CTAGE5; MIA3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005293

Gene Model ID

KH2012:KH.C3.138

Location

KhC3:1873127..1894346

Transcript Models and Sequences

  KH2012:KH.C3.138.v1.A.SL1-1
KH2012:KH.C3.138.v1.A.SL3-1
KH2012:KH.C3.138.v1.A.SL4-1
KH2012:KH.C3.138.v1.A.SL5-1
KH2012:KH.C3.138.v2.A.ND2-1

External Database Gene Card

External database links

4 results

Database Gene ID
ENSEMBL ENSCING00000012802
ENSEMBL ENSCING00000020787
ENSEMBL ENSCING00000023136
NCBI Reference Sequence XM_018817866.1
Collections

Gateway full ORF

4 results

cien133204

Plate: VES91_G03

cien133823

Plate: VES91_B07

cien135683

Plate: VES91_C13

cien199100

Plate: VES101_E05

Gene collection 1 (N. Satoh)

6 results

citb3j3

Plate: R1CiGC29a15

cieg003n04

Plate: R1CiGC15n08

cieg032f11

Plate: R1CiGC20f14

ciad026d10

Plate: R1CiGC03g16

cits042p04

Plate: R1CiGC35m14

cieg074b13

Plate: R1CiGC40a10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
P_trefoil_dom CDD P-type trefoil domain
P_trefoil_dom ProSiteProfiles P-type trefoil domain
SH3_domain SMART SH3 domain
SH3_domain ProSiteProfiles SH3 domain
SH3-like_dom_sf SUPERFAMILY SH3-like domain superfamily
SH3_domain Pfam SH3 domain

GOSlim

11 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
protein binding Blast molecular function
endoplasmic reticulum Blast cellular component
endoplasmic reticulum lumen Blast cellular component
endoplasmic reticulum membrane Blast cellular component
enzyme activator activity Blast molecular function
protein transport Blast biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
endoplasmic reticulum part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 141 3.39e-33
protein binding Hs molecular function 141 3.39e-33
endoplasmic reticulum Hs cellular component 141 3.39e-33
endoplasmic reticulum lumen Hs cellular component 141 3.39e-33
endoplasmic reticulum membrane Hs cellular component 141 3.39e-33
enzyme activator activity Hs molecular function 113 5.90e-25
membrane Hs cellular component 141 3.39e-33
integral component of membrane Hs cellular component 141 3.39e-33
lipoprotein transporter activity Hs molecular function 141 3.39e-33
intracellular membrane-bounded organelle Hs cellular component 141 3.39e-33
endoplasmic reticulum exit site Hs cellular component 141 3.39e-33

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 5.74E-10

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