Aniseed - Gene card

Gene 'KH2012:KH.C3.123'

Gene Card

Best human hits

CLEC16A

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005277

Gene Model ID

KH2012:KH.C3.123

Location

KhC3:2813972..2832307

Transcript Models and Sequences

KH2012:KH.C3.123.v1.C.SL1-1
KH2012:KH.C3.123.v1.C.SL2-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000005714
NCBI Reference Sequence	XM_002127519.3
NCBI Reference Sequence	XM_018811136.1
NCBI Reference Sequence	XM_018811137.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl010o06

Plate: R1CiGC09l19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
CLEC16A/TT9_N	Pfam	CLEC16A/TT9, N-terminal

GOSlim

16 results

GO Term	Annotation Origin	Type
lysosome	Orthology	cellular component
lysosomal membrane	Orthology	cellular component
endosome	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
cytosol	Orthology	cellular component
membrane	Orthology	cellular component
vesicle	Orthology	cellular component
cell communication	Orthology	biological process
cellular response to stress	Orthology	biological process
intracellular organelle part	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
proteolysis	Orthology	biological process
organelle organization	Orthology	biological process
intracellular signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
lysosome	Hs	cellular component
lysosomal membrane	Hs	cellular component
endosome	Hs	cellular component
Golgi apparatus	Hs	cellular component
cytosol	Hs	cellular component
autophagy	Hs	biological process
cellular response to starvation	Hs	biological process
endosome membrane	Hs	cellular component
membrane	Hs	cellular component
vesicle	Hs	cellular component
negative regulation of proteasomal ubiquitin-dependent protein catabolic process	Hs	biological process
endolysosome membrane	Hs	cellular component
negative regulation of autophagosome maturation	Hs	biological process
positive regulation of autophagosome maturation	Hs	biological process
positive regulation of TORC1 signaling	Hs	biological process

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
lysosome	Hs	cellular component	894
lysosomal membrane	Hs	cellular component	894
endosome	Hs	cellular component	894
Golgi apparatus	Hs	cellular component	894
cytosol	Hs	cellular component	894
endosome membrane	Hs	cellular component	894
membrane	Hs	cellular component	894
vesicle	Hs	cellular component	894
endolysosome membrane	Hs	cellular component	894

GO (InterProScan)