Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000020227
NCBI Reference Sequence	NM_001078219.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

3 results

cicl051e11

Plate: R1CiGC14a03

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
E2F_CC-MB	CDD	E2F transcription factor, CC-MB domain
E2F_CC-MB	Pfam	E2F transcription factor, CC-MB domain
E2F_WHTH_DNA-bd_dom	Pfam	E2F/DP family, winged-helix DNA-binding domain
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily
E2F_WHTH_DNA-bd_dom	SMART	E2F/DP family, winged-helix DNA-binding domain
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily
E2F	PANTHER	E2F Family
E2F-DP_heterodim	SUPERFAMILY	E2F-DP heterodimerization region

GOSlim

43 results

GO Term	Annotation Origin	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription initiation from RNA polymerase II promoter	Orthology	biological process
cell cycle	Orthology	biological process
transcription factor binding	Orthology	molecular function
positive regulation of cell proliferation	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
protein dimerization activity	Orthology	molecular function
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
centrosome	Orthology	cellular component
apoptotic process	Orthology	biological process
spermatogenesis	Orthology	biological process
positive regulation of gene expression	Orthology	biological process
protein kinase binding	Orthology	molecular function
macromolecular complex	Orthology	cellular component
positive regulation of apoptotic process	Orthology	biological process
transcription regulatory region DNA binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
intracellular part	Orthology	cellular component
intracellular signal transduction	Orthology	biological process
nuclear part	Orthology	cellular component
angiogenesis	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
brain development	Orthology	biological process
regulation of molecular function	Orthology	biological process
mRNA catabolic process	Orthology	biological process
response to hypoxia	Orthology	biological process
cellular response to stress	Orthology	biological process
G1/S transition of mitotic cell cycle	Orthology	biological process

GO (Orthology)

48 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
core promoter binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor complex	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription initiation from RNA polymerase II promoter	Hs	biological process
cell cycle	Hs	biological process
transcription factor binding	Hs	molecular function
positive regulation of cell proliferation	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein dimerization activity	Hs	molecular function
regulation of cell cycle	Hs	biological process
intrinsic apoptotic signaling pathway by p53 class mediator	Hs	biological process
RNA polymerase II transcription factor complex	Hs	cellular component
negative regulation of sprouting angiogenesis	Hs	biological process
DNA damage checkpoint	Hs	biological process
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
nuclear chromatin	Hs	cellular component
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
centrosome	Hs	cellular component
apoptotic process	Hs	biological process
spermatogenesis	Hs	biological process
intrinsic apoptotic signaling pathway in response to DNA damage	Hs	biological process
positive regulation of gene expression	Hs	biological process
protein kinase binding	Hs	molecular function
forebrain development	Hs	biological process
macromolecular complex	Hs	cellular component
Rb-E2F complex	Hs	cellular component
positive regulation of apoptotic process	Hs	biological process
negative regulation of DNA binding	Hs	biological process
transcription regulatory region DNA binding	Hs	molecular function
negative regulation of transcription, DNA-templated	Hs	biological process
mRNA stabilization	Hs	biological process
cellular response to hypoxia	Hs	biological process
cellular response to xenobiotic stimulus	Hs	biological process
negative regulation of transcription involved in G1/S transition of mitotic cell cycle	Hs	biological process
regulation of G1/S transition of mitotic cell cycle	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	235	1.32e-72
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	235	1.32e-72
core promoter binding	Hs	molecular function	235	1.32e-72
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	235	1.32e-72
DNA binding	Hs	molecular function	235	1.32e-72
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	235	1.32e-72
protein binding	Hs	molecular function	235	1.32e-72
nucleus	Hs	cellular component	235	1.32e-72
nucleoplasm	Hs	cellular component	235	1.32e-72
transcription factor complex	Hs	cellular component	235	1.32e-72
transcription factor binding	Hs	molecular function	225	4.08e-69
sequence-specific DNA binding	Hs	molecular function	235	1.32e-72
protein dimerization activity	Hs	molecular function	235	1.32e-72
RNA polymerase II transcription factor complex	Hs	cellular component	235	1.32e-72

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	SMART	molecular function	3.2E-33
transcription factor complex	SMART	cellular component	3.2E-33
regulation of transcription, DNA-templated	SMART	biological process	3.2E-33
protein dimerization activity	CDD	molecular function	2.50263E-42

Gene Card

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Transcript Models and Sequences