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GENE CARD

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Gene Card

Best human hits

ADRM1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004863

Gene Model ID

KH2012:KH.C2.643

Location

KhC2:6871910..6875467

Transcript Models and Sequences

  KH2012:KH.C2.643.v1.A.ND3-1
KH2012:KH.C2.643.v1.A.nonSL10-1
KH2012:KH.C2.643.v1.A.nonSL11-1
KH2012:KH.C2.643.v1.A.nonSL13-1
KH2012:KH.C2.643.v1.A.nonSL4-1
KH2012:KH.C2.643.v1.A.nonSL5-1
KH2012:KH.C2.643.v1.A.nonSL6-1
KH2012:KH.C2.643.v1.A.nonSL8-1
KH2012:KH.C2.643.v1.A.nonSL9-1
KH2012:KH.C2.643.v1.A.SL1-1
KH2012:KH.C2.643.v1.A.SL12-1
KH2012:KH.C2.643.v1.A.SL2-1
KH2012:KH.C2.643.v1.A.SL7-1

External Database Gene Card

External database links

2 results

Database Gene ID
NCBI Reference Sequence XM_002131324.3
NCBI Reference Sequence XM_009859420.2
Collections

Gateway full ORF

2 results

cien35658

Plate: VES75_K23

cima895092

Plate: VES71_E16

Gene collection 1 (N. Satoh)

1 result

ciad058m16

Plate: R1CiGC06e13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
RPN13_C_sf Gene3D UCH-binding domain superfamily
RPN13_C Pfam UCH-binding domain
Rpn13/ADRM1 Pfam Proteasomal ubiquitin receptor Rpn13/ADRM1
Rpn13/ADRM1 PANTHER Proteasomal ubiquitin receptor Rpn13/ADRM1
Rpn13/ADRM1_sf Gene3D Proteasomal ubiquitin receptor Rpn13/ADRM1 superfamily

GOSlim

18 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
integral component of plasma membrane Orthology cellular component
membrane Orthology cellular component
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
enzyme binding Orthology molecular function
transcription from RNA polymerase II promoter Orthology biological process
proteolysis Orthology biological process
endopeptidase activity Orthology molecular function
positive regulation of hydrolase activity Orthology biological process
peptidase activity, acting on L-amino acid peptides Orthology molecular function
enzyme activator activity Orthology molecular function
macromolecular complex binding Orthology molecular function

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
proteasome complex Hs cellular component
protease binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
integral component of plasma membrane Hs cellular component
transcription elongation from RNA polymerase II promoter Hs biological process
ubiquitin-dependent protein catabolic process Hs biological process
proteasome regulatory particle, lid subcomplex Hs cellular component
positive regulation of endopeptidase activity Hs biological process
membrane Hs cellular component
protein deubiquitination Hs biological process
ubiquitin binding Hs molecular function
proteasome assembly Hs biological process
endopeptidase activator activity Hs molecular function
proteasome binding Hs molecular function

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
proteasome complex Hs cellular component 232 4.06e-73
protease binding Hs molecular function 232 4.06e-73
protein binding Hs molecular function 232 4.06e-73
nucleus Hs cellular component 232 4.06e-73
nucleoplasm Hs cellular component 232 4.06e-73
cytoplasm Hs cellular component 232 4.06e-73
cytosol Hs cellular component 232 4.06e-73
plasma membrane Hs cellular component 232 4.06e-73
integral component of plasma membrane Hs cellular component 232 4.06e-73
proteasome regulatory particle, lid subcomplex Hs cellular component 232 4.06e-73
membrane Hs cellular component 232 4.06e-73
ubiquitin binding Hs molecular function 232 4.06e-73
endopeptidase activator activity Hs molecular function 232 4.06e-73
proteasome binding Hs molecular function 232 4.06e-73

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleus PANTHER cellular component 3.6E-111
cytoplasm PANTHER cellular component 3.6E-111

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