Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000006377

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb5a23

Plate: R1CiGC29c04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

1 results

Tubby-like -1190/-6 REG00000549 [ regulatory_region (extended_promoter) ]

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Tubby-like_C	SUPERFAMILY	Tubby-like, C-terminal
Tubby_C	PRINTS	Tubby, C-terminal
Tubby_C_CS	ProSitePatterns	Tubby, C-terminal, conserved site
Tubby-like_C	Gene3D	Tubby-like, C-terminal
Tubby_C	Pfam	Tubby, C-terminal

GOSlim

49 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
nucleus	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
regulation of transcription, DNA-templated	Orthology	biological process
G-protein coupled receptor signaling pathway	Orthology	biological process
multicellular organism development	Orthology	biological process
brain development	Orthology	biological process
visual perception	Orthology	biological process
sensory perception of sound	Orthology	biological process
membrane	Orthology	cellular component
enzyme binding	Orthology	molecular function
cell junction	Orthology	cellular component
cell projection	Orthology	cellular component
macromolecular complex binding	Orthology	molecular function
synapse	Orthology	cellular component
response to stimulus	Orthology	biological process
actin filament binding	Orthology	molecular function
organelle part	Orthology	cellular component
cell projection part	Orthology	cellular component
neuron projection	Orthology	cellular component
macromolecular complex	Orthology	cellular component
anatomical structure formation involved in morphogenesis	Orthology	biological process
nervous system development	Orthology	biological process
neuron part	Orthology	cellular component
anion binding	Orthology	molecular function
organelle	Orthology	cellular component
plasma membrane region	Orthology	cellular component
microtubule	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
regulation of signal transduction	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
response to organic substance	Orthology	biological process
neuron projection development	Orthology	biological process
central nervous system development	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
animal organ development	Orthology	biological process
neuron differentiation	Orthology	biological process
neuron development	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
axon	Orthology	cellular component
synapse part	Orthology	cellular component
protein localization to membrane	Orthology	biological process
protein localization to organelle	Orthology	biological process

GO (Orthology)

57 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
photoreceptor outer segment	Hs	cellular component
neural tube formation	Hs	biological process
neural tube closure	Hs	biological process
retina homeostasis	Hs	biological process
photoreceptor inner segment	Hs	cellular component
protein binding	Hs	molecular function
phosphatidylinositol-4,5-bisphosphate binding	Hs	molecular function
extracellular region	Hs	cellular component
nucleus	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
cilium	Hs	cellular component
axoneme	Hs	cellular component
regulation of transcription, DNA-templated	Hs	biological process
phagocytosis	Hs	biological process
phagocytosis, recognition	Hs	biological process
G-protein coupled receptor signaling pathway	Hs	biological process
multicellular organism development	Hs	biological process
brain development	Hs	biological process
visual perception	Hs	biological process
sensory perception of sound	Hs	biological process
regulation of G-protein coupled receptor protein signaling pathway	Hs	biological process
regulation of smoothened signaling pathway	Hs	biological process
response to hormone	Hs	biological process
anterior/posterior pattern specification	Hs	biological process
membrane	Hs	cellular component
vesicle-mediated transport	Hs	biological process
dendrite development	Hs	biological process
enzyme binding	Hs	molecular function
negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning	Hs	biological process
neural tube development	Hs	biological process
central nervous system neuron differentiation	Hs	biological process
cell junction	Hs	cellular component
intraciliary transport particle A	Hs	cellular component
embryonic camera-type eye development	Hs	biological process
phosphatidylinositol binding	Hs	molecular function
eye photoreceptor cell development	Hs	biological process
cell projection	Hs	cellular component
axon terminus	Hs	cellular component
macromolecular complex binding	Hs	molecular function
synapse	Hs	cellular component
photoreceptor cell maintenance	Hs	biological process
negative regulation of smoothened signaling pathway	Hs	biological process
embryonic neurocranium morphogenesis	Hs	biological process
positive regulation of phagocytosis	Hs	biological process
response to stimulus	Hs	biological process
detection of light stimulus involved in visual perception	Hs	biological process
actin filament binding	Hs	molecular function
retina development in camera-type eye	Hs	biological process
limb development	Hs	biological process
bone development	Hs	biological process
receptor localization to non-motile cilium	Hs	biological process
ciliary base	Hs	cellular component
negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning	Hs	biological process
protein localization to photoreceptor outer segment	Hs	biological process

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
photoreceptor outer segment	Hs	cellular component	364	5.92e-121
photoreceptor inner segment	Hs	cellular component	364	5.92e-121
protein binding	Hs	molecular function	405	9.24e-138
phosphatidylinositol-4,5-bisphosphate binding	Hs	molecular function	405	9.24e-138
extracellular region	Hs	cellular component	425	1.60e-144
nucleus	Hs	cellular component	425	1.60e-144
nucleolus	Hs	cellular component	405	9.24e-138
cytoplasm	Hs	cellular component	425	1.60e-144
cytosol	Hs	cellular component	425	1.60e-144
plasma membrane	Hs	cellular component	425	1.60e-144
cilium	Hs	cellular component	425	1.60e-144
axoneme	Hs	cellular component	405	9.24e-138
membrane	Hs	cellular component	425	1.60e-144
enzyme binding	Hs	molecular function	405	9.24e-138
cell junction	Hs	cellular component	364	5.92e-121
intraciliary transport particle A	Hs	cellular component	405	9.24e-138
phosphatidylinositol binding	Hs	molecular function	425	1.60e-144
cell projection	Hs	cellular component	405	9.24e-138
axon terminus	Hs	cellular component	364	5.92e-121
macromolecular complex binding	Hs	molecular function	425	1.60e-144
synapse	Hs	cellular component	364	5.92e-121
actin filament binding	Hs	molecular function	364	5.92e-121
ciliary base	Hs	cellular component	405	9.24e-138

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences