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GENE CARD

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  1. Gene 'KH2012:KH.C2.784'

Gene Card

Best human hits

RPLP1

Unique Gene ID

Cirobu.g00004393

Gene Model ID

KH2012:KH.C2.216

Location

KhC2:225443..227603

Transcript Models and Sequences

  KH2012:KH.C2.216.v1.A.ND2-1
KH2012:KH.C2.216.v1.A.nonSL10-1
KH2012:KH.C2.216.v1.A.nonSL1-1
KH2012:KH.C2.216.v1.A.nonSL11-1
KH2012:KH.C2.216.v1.A.nonSL12-1
KH2012:KH.C2.216.v1.A.nonSL13-1
KH2012:KH.C2.216.v1.A.nonSL14-1
KH2012:KH.C2.216.v1.A.nonSL15-1
KH2012:KH.C2.216.v1.A.nonSL16-1
KH2012:KH.C2.216.v1.A.nonSL17-1
KH2012:KH.C2.216.v1.A.nonSL18-1
KH2012:KH.C2.216.v1.A.nonSL19-1
KH2012:KH.C2.216.v1.A.nonSL20-1
KH2012:KH.C2.216.v1.A.nonSL21-1
KH2012:KH.C2.216.v1.A.nonSL22-1
KH2012:KH.C2.216.v1.A.nonSL23-1
KH2012:KH.C2.216.v1.A.nonSL24-1
KH2012:KH.C2.216.v1.A.nonSL25-1
KH2012:KH.C2.216.v1.A.nonSL26-1
KH2012:KH.C2.216.v1.A.nonSL27-1
KH2012:KH.C2.216.v1.A.nonSL28-1
KH2012:KH.C2.216.v1.A.nonSL29-1
KH2012:KH.C2.216.v1.A.nonSL30-1
KH2012:KH.C2.216.v1.A.nonSL3-1
KH2012:KH.C2.216.v1.A.nonSL31-1
KH2012:KH.C2.216.v1.A.nonSL32-1
KH2012:KH.C2.216.v1.A.nonSL33-1
KH2012:KH.C2.216.v1.A.nonSL4-1
KH2012:KH.C2.216.v1.A.nonSL5-1
KH2012:KH.C2.216.v1.A.nonSL6-1
KH2012:KH.C2.216.v1.A.nonSL7-1
KH2012:KH.C2.216.v1.A.nonSL8-1
KH2012:KH.C2.216.v1.A.nonSL9-1
KH2012:KH.C2.216.v2.A.ND2-1
KH2012:KH.C2.216.v2.A.nonSL10-1
KH2012:KH.C2.216.v2.A.nonSL1-1
KH2012:KH.C2.216.v2.A.nonSL11-1
KH2012:KH.C2.216.v2.A.nonSL12-1
KH2012:KH.C2.216.v2.A.nonSL13-1
KH2012:KH.C2.216.v2.A.nonSL14-1
KH2012:KH.C2.216.v2.A.nonSL15-1
KH2012:KH.C2.216.v2.A.nonSL16-1
KH2012:KH.C2.216.v2.A.nonSL17-1
KH2012:KH.C2.216.v2.A.nonSL18-1
KH2012:KH.C2.216.v2.A.nonSL19-1
KH2012:KH.C2.216.v2.A.nonSL20-1
KH2012:KH.C2.216.v2.A.nonSL21-1
KH2012:KH.C2.216.v2.A.nonSL22-1
KH2012:KH.C2.216.v2.A.nonSL23-1
KH2012:KH.C2.216.v2.A.nonSL24-1
KH2012:KH.C2.216.v2.A.nonSL25-1
KH2012:KH.C2.216.v2.A.nonSL26-1
KH2012:KH.C2.216.v2.A.nonSL27-1
KH2012:KH.C2.216.v2.A.nonSL28-1
KH2012:KH.C2.216.v2.A.nonSL29-1
KH2012:KH.C2.216.v2.A.nonSL30-1
KH2012:KH.C2.216.v2.A.nonSL3-1
KH2012:KH.C2.216.v2.A.nonSL31-1
KH2012:KH.C2.216.v2.A.nonSL32-1
KH2012:KH.C2.216.v2.A.nonSL33-1
KH2012:KH.C2.216.v2.A.nonSL4-1
KH2012:KH.C2.216.v2.A.nonSL5-1
KH2012:KH.C2.216.v2.A.nonSL6-1
KH2012:KH.C2.216.v2.A.nonSL7-1
KH2012:KH.C2.216.v2.A.nonSL8-1
KH2012:KH.C2.216.v2.A.nonSL9-1

External Database Gene Card

External database links

2 results

Collections

Gateway full ORF

2 results

cima831607

Plate: VES62_J05

cima827060

Plate: VES61_D05

Gene collection 1 (N. Satoh)

5 results

ciad081h18

Plate: R1CiGC08e09

cilv011i11

Plate: R1CiGC25n02

ciad019g17

Plate: R1CiGC03g05

ciad025k11

Plate: R1CiGC03c24

cicl004i05

Plate: R1CiGC08p03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
P1/P2_N_sf Gene3D Ribosomal protein P1/P2, N-terminal domain
Ribosomal_L12 Hamap Ribosomal protein L12 family

GOSlim

16 results

GO Term Annotation Origin Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Orthology biological process
structural constituent of ribosome Orthology molecular function
protein binding Orthology molecular function
intracellular Orthology cellular component
cytosol Orthology cellular component
ribosome Orthology cellular component
focal adhesion Orthology cellular component
translational initiation Orthology biological process
SRP-dependent cotranslational protein targeting to membrane Orthology biological process
extracellular exosome Orthology cellular component
RNA processing Orthology biological process
intracellular organelle part Orthology cellular component
enzyme activator activity Orthology molecular function
protein kinase binding Orthology molecular function
protein kinase activity Orthology molecular function
positive regulation of catalytic activity Orthology biological process

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
cytoplasmic translation Hs biological process
structural constituent of ribosome Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
focal adhesion Hs cellular component
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
translational elongation Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
cytosolic large ribosomal subunit Hs cellular component
protein kinase activator activity Hs molecular function
intracellular ribonucleoprotein complex Hs cellular component
activation of protein kinase activity Hs biological process
positive regulation of protein kinase activity Hs biological process
extracellular exosome Hs cellular component

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
structural constituent of ribosome Hs molecular function 94.7 1.30e-26
protein binding Hs molecular function 94.7 1.30e-26
intracellular Hs cellular component 94.7 1.30e-26
cytosol Hs cellular component 94.7 1.30e-26
ribosome Hs cellular component 94.7 1.30e-26
focal adhesion Hs cellular component 94.7 1.30e-26
cytosolic large ribosomal subunit Hs cellular component 94.7 1.30e-26
protein kinase activator activity Hs molecular function 94.7 1.30e-26
intracellular ribonucleoprotein complex Hs cellular component 94.7 1.30e-26
extracellular exosome Hs cellular component 94.7 1.30e-26

GO (InterProScan)

4 results

GO Term Analysis Type e-value
structural constituent of ribosome Hamap molecular function 12.731
intracellular Hamap cellular component 12.731
ribosome Hamap cellular component 12.731
translational elongation Hamap biological process 12.731