Aniseed - Gene card

Gene 'KH2012:KH.C2.214'

Gene Card

Best human hits

BUD13

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004392

Gene Model ID

KH2012:KH.C2.214

Location

KhC2:7192385..7196381

Transcript Models and Sequences

KH2012:KH.C2.214.v1.A.SL1-1
KH2012:KH.C2.214.v1.A.SL2-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000006692
NCBI Reference Sequence	XM_002132107.3
NCBI Reference Sequence	XM_009859433.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cieg016m10

Plate: R1CiGC18g01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
Bud13	Pfam	Bud13

GOSlim

8 results

GO Term	Annotation Origin	Type
mRNA splicing, via spliceosome	Orthology	biological process
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
intracellular protein transport	Orthology	biological process
gene expression	Orthology	biological process
nuclear part	Orthology	cellular component
macromolecular complex	Orthology	cellular component

GO (Orthology)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
mRNA splicing, via spliceosome	Hs	biological process
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
mRNA export from nucleus	Hs	biological process
RES complex	Hs	cellular component

GO (Blast)

4 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	201	1.08e-57
protein binding	Hs	molecular function	201	1.08e-57
nucleus	Hs	cellular component	201	1.08e-57
RES complex	Hs	cellular component	201	1.08e-57

GO (InterProScan)