Aniseed - Gene card

Gene 'KH2012:KH.C14.601'

Gene Card

Best human hits

ARL14; SAR1A; SAR1B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004050

Gene Model ID

KH2012:KH.C14.601

Location

KhC14:1944267..1948025

Transcript Models and Sequences

KH2012:KH.C14.601.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005807
NCBI Reference Sequence	XM_002129639.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg001j10

Plate: R1CiGC15h07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Small_GTPase_ARF/SAR	Pfam	Small GTPase superfamily, ARF/SAR type
Small_GTPase_SAR1	ProSiteProfiles	Small GTPase superfamily, SAR1-type
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
Small_GTP-bd_dom	TIGRFAM	Small GTP-binding protein domain
Small_GTPase_ARF/SAR	PRINTS	Small GTPase superfamily, ARF/SAR type

GOSlim

21 results

GO Term	Annotation Origin	Type
Golgi membrane	Blast	cellular component
nucleotide binding	Blast	molecular function
GTPase activity	Blast	molecular function
protein binding	Blast	molecular function
GTP binding	Blast	molecular function
intracellular	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
Golgi apparatus	Blast	cellular component
cytosol	Blast	cellular component
intracellular protein transport	InterProScan	biological process
membrane	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
metal ion binding	Blast	molecular function
extracellular exosome	Blast	cellular component
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
intracellular organelle part	Blast	cellular component
endomembrane system	Blast	cellular component
membrane part	Blast	cellular component
macromolecular complex	Blast	cellular component

GO (Orthology)