Aniseed - Gene card

Gene 'KH2012:KH.C14.525'

Gene Card

Best human hits

SV2A; SV2B; SV2C

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003969

Gene Model ID

KH2012:KH.C14.525

Location

KhC14:2456379..2463860

Transcript Models and Sequences

KH2012:KH.C14.525.v1.B.ND1-1
KH2012:KH.C14.525.v1.B.nonSL2-1
KH2012:KH.C14.525.v2.B.ND1-2
KH2012:KH.C14.525.v2.B.nonSL2-2
KH2012:KH.C14.525.v3.A.ND1-3
KH2012:KH.C14.525.v3.A.nonSL2-3
KH2012:KH.C14.525.v4.B.SL3-1
KH2012:KH.C14.525.v5.A.SL3-3
KH2012:KH.C14.525.v6.B.SL3-2

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000000453
NCBI Reference Sequence	XM_018814898.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cinc019i01

Plate: R1CiGC45a04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
MFS_trans_sf	SUPERFAMILY	MFS transporter superfamily
MFS_dom	ProSiteProfiles	Major facilitator superfamily domain
MFS	Pfam	Major facilitator superfamily
MFS_dom	CDD	Major facilitator superfamily domain
MFS_sugar_transport-like	Pfam	Major facilitator, sugar transporter-like
Sugar_transporter_CS	ProSitePatterns	Sugar transporter, conserved site

GOSlim

23 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
endoplasmic reticulum	Orthology	cellular component
plasma membrane	Orthology	cellular component
chemical synaptic transmission	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
protein kinase binding	Orthology	molecular function
cell junction	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
neuron projection	Orthology	cellular component
neuronal cell body	Orthology	cellular component
synapse	Orthology	cellular component
transmembrane transport	Orthology	biological process
endomembrane system	Orthology	cellular component
cellular process	Orthology	biological process
cell	Orthology	cellular component
synapse part	Orthology	cellular component
neuron part	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
cell projection part	Orthology	cellular component
axon	Orthology	cellular component

GO (Orthology)

27 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
acrosomal vesicle	Hs	cellular component
receptor activity	Hs	molecular function
transporter activity	Hs	molecular function
protein binding	Hs	molecular function
endoplasmic reticulum	Hs	cellular component
plasma membrane	Hs	cellular component
cell-cell junction	Hs	cellular component
neurotransmitter transport	Hs	biological process
cellular calcium ion homeostasis	Hs	biological process
chemical synaptic transmission	Hs	biological process
synaptic vesicle	Hs	cellular component
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
protein kinase binding	Hs	molecular function
transmembrane transporter activity	Hs	molecular function
cell junction	Hs	cellular component
integral component of synaptic vesicle membrane	Hs	cellular component
dendrite	Hs	cellular component
synaptic vesicle membrane	Hs	cellular component
cytoplasmic vesicle	Hs	cellular component
neuromuscular junction	Hs	cellular component
neuron projection	Hs	cellular component
neuronal cell body	Hs	cellular component
terminal bouton	Hs	cellular component
synapse	Hs	cellular component
presynaptic active zone	Hs	cellular component
transmembrane transport	Hs	biological process

GO (Blast)