Aniseed - Gene card

Gene 'KH2012:KH.C14.487'

Gene Card

Best human hits

MRPL21

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003926

Gene Model ID

KH2012:KH.C14.487

Location

KhC14:2951296..2954412

Transcript Models and Sequences

KH2012:KH.C14.487.v1.A.ND1-1
KH2012:KH.C14.487.v1.A.nonSL3-1
KH2012:KH.C14.487.v1.A.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000021637
ENSEMBL	ENSCING00000022513

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl057j14

Plate: R1CiGC14j14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
L21p-like	Pfam	Ribosomal protein L21-like
L21p-like	PANTHER	Ribosomal protein L21-like
Ribosomal_L21	TIGRFAM	Ribosomal protein L21
L21-like_sf	SUPERFAMILY	L21-like superfamily

GOSlim

7 results

GO Term	Annotation Origin	Type
RNA binding	Orthology	molecular function
structural constituent of ribosome	Orthology	molecular function
intracellular	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
ribosome	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA binding	Hs	molecular function
structural constituent of ribosome	Hs	molecular function
intracellular	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial large ribosomal subunit	Hs	cellular component
ribosome	Hs	cellular component
translation	Hs	biological process
intracellular ribonucleoprotein complex	Hs	cellular component
mitochondrial translational elongation	Hs	biological process
mitochondrial translational termination	Hs	biological process

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	111	1.31e-30
structural constituent of ribosome	Hs	molecular function	111	1.31e-30
intracellular	Hs	cellular component	111	1.31e-30
mitochondrion	Hs	cellular component	111	1.31e-30
mitochondrial inner membrane	Hs	cellular component	111	1.31e-30
mitochondrial large ribosomal subunit	Hs	cellular component	111	1.31e-30
ribosome	Hs	cellular component	111	1.31e-30
intracellular ribonucleoprotein complex	Hs	cellular component	111	1.31e-30

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
RNA binding	TIGRFAM	molecular function	1.7E-12
structural constituent of ribosome	TIGRFAM	molecular function	1.7E-12
intracellular	TIGRFAM	cellular component	1.7E-12
ribosome	PANTHER	cellular component	2.1E-37
translation	TIGRFAM	biological process	1.7E-12