Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
NCBI Reference Sequence	XM_018814865.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg045l22

Plate: R1CiGC22l18

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Kinase-like_dom_sf	SUPERFAMILY	Protein kinase-like domain superfamily
Prot_kinase_dom	ProSiteProfiles	Protein kinase domain
PAN3	Hamap	PAN2-PAN3 deadenylation complex subunit PAN3

GOSlim

33 results

GO Term	Annotation Origin	Type
Golgi membrane	Blast	cellular component
nucleotide binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein kinase activity	Orthology	molecular function
protein serine/threonine kinase activity	Blast	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component
cytoplasm	Orthology	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
Golgi apparatus	Blast	cellular component
microtubule organizing center	Blast	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Blast	cellular component
microtubule	Blast	cellular component
mRNA processing	Orthology	biological process
protein phosphorylation	Orthology	biological process
protein targeting	Orthology	biological process
membrane	Blast	cellular component
kinase activity	Blast	molecular function
transferase activity	Blast	molecular function
metal ion binding	Orthology	molecular function
nuclear-transcribed mRNA catabolic process	Orthology	biological process
cytoplasmic part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
macromolecular complex	Orthology	cellular component
RNA metabolic process	Orthology	biological process
hydrolase activity	Orthology	molecular function
cytoskeletal part	Blast	cellular component
microtubule cytoskeleton	Blast	cellular component

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	Hs	biological process
nuclear-transcribed mRNA poly(A) tail shortening	Hs	biological process
deadenylation-dependent decapping of nuclear-transcribed mRNA	Hs	biological process
P-body	Hs	cellular component
RNA binding	Hs	molecular function
poly(A)-specific ribonuclease activity	Hs	molecular function
protein kinase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
mRNA processing	Hs	biological process
protein phosphorylation	Hs	biological process
protein targeting	Hs	biological process
positive regulation of cytoplasmic mRNA processing body assembly	Hs	biological process
PAN complex	Hs	cellular component
metal ion binding	Hs	molecular function
RNA phosphodiester bond hydrolysis, exonucleolytic	Hs	biological process

GO (Blast)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	50.4	3.30e-06
nucleotide binding	Hs	molecular function	627	0.0
spindle pole	Hs	cellular component	59.3	2.12e-09
P-body	Hs	cellular component	627	0.0
RNA binding	Hs	molecular function	627	0.0
poly(A)-specific ribonuclease activity	Hs	molecular function	627	0.0
protein kinase activity	Hs	molecular function	627	0.0
protein serine/threonine kinase activity	Hs	molecular function	59.3	2.12e-09
protein binding	Hs	molecular function	627	0.0
ATP binding	Hs	molecular function	627	0.0
nucleus	Hs	cellular component	59.3	2.12e-09
nucleoplasm	Hs	cellular component	59.3	2.12e-09
nucleolus	Hs	cellular component	50.4	3.30e-06
cytoplasm	Hs	cellular component	627	0.0
endoplasmic reticulum	Hs	cellular component	50.4	3.30e-06
endoplasmic reticulum membrane	Hs	cellular component	50.4	3.30e-06
Golgi apparatus	Hs	cellular component	50.4	3.30e-06
microtubule organizing center	Hs	cellular component	59.3	2.12e-09
cytosol	Hs	cellular component	627	0.0
cytoskeleton	Hs	cellular component	59.3	2.12e-09
microtubule	Hs	cellular component	59.3	2.12e-09
membrane	Hs	cellular component	50.4	3.30e-06
kinase activity	Hs	molecular function	59.3	2.12e-09
transferase activity	Hs	molecular function	59.3	2.12e-09
PAN complex	Hs	cellular component	627	0.0
metal ion binding	Hs	molecular function	627	0.0

GO (InterProScan)

7 results

GO Term	Analysis	Type	e-value
nuclear-transcribed mRNA poly(A) tail shortening	Hamap	biological process	24.876
RNA binding	Hamap	molecular function	24.876
protein kinase activity	ProSiteProfiles	molecular function	8.697
ATP binding	ProSiteProfiles	molecular function	8.697
mRNA processing	Hamap	biological process	24.876
protein phosphorylation	ProSiteProfiles	biological process	8.697
PAN complex	Hamap	cellular component	24.876

Gene Card

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