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Gene Card

Best human hits

RERG; RIT1; RIT2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003807

Gene Model ID

KH2012:KH.C14.378

Location

KhC14:2532613..2543606

Transcript Models and Sequences

  KH2012:KH.C14.378.v1.A.ND1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000014467
Collections

Gateway full ORF

1 result

cima838259

Plate: VES63_L08

Gene collection 1 (N. Satoh)

1 result

cigd040f10

Plate: R1CiGC41h23

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Small_GTPase_Ras ProSiteProfiles Small GTPase superfamily, Ras type
Small_GTPase Pfam Small GTPase superfamily
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain
Small_GTPase_Ras PANTHER Small GTPase superfamily, Ras type
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

21 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
chromatin binding Blast molecular function
GTPase activity Blast molecular function
protein binding Blast molecular function
calmodulin binding Blast molecular function
GTP binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
signal transduction InterProScan biological process
membrane Blast cellular component
neuron projection Blast cellular component
cell body Blast cellular component
membrane raft Blast cellular component
anion binding Blast molecular function
guanyl ribonucleotide binding Blast molecular function
purine ribonucleoside binding Blast molecular function
receptor binding Blast molecular function
transcription factor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 144 1.26e-41
chromatin binding Hs molecular function 122 5.38e-33
GTPase activity Hs molecular function 144 1.26e-41
protein binding Hs molecular function 122 5.38e-33
calmodulin binding Hs molecular function 122 5.38e-33
GTP binding Hs molecular function 144 1.26e-41
intracellular Hs cellular component 118 2.90e-31
nucleus Hs cellular component 144 1.26e-41
cytoplasm Hs cellular component 144 1.26e-41
cytosol Hs cellular component 144 1.26e-41
plasma membrane Hs cellular component 122 5.38e-33
membrane Hs cellular component 144 1.26e-41
GDP binding Hs molecular function 144 1.26e-41
semaphorin receptor binding Hs molecular function 122 5.38e-33
estrogen receptor binding Hs molecular function 144 1.26e-41
neuron projection Hs cellular component 122 5.38e-33
cell body Hs cellular component 122 5.38e-33
membrane raft Hs cellular component 122 5.38e-33
dendritic tree Hs cellular component 122 5.38e-33

GO (InterProScan)

4 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 9.9E-32
GTP binding PANTHER molecular function 1.9E-58
signal transduction PANTHER biological process 1.9E-58
membrane PANTHER cellular component 1.9E-58

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