- Gene 'KH2012:KH.C14.35'
Gene Card
Best human hits
AC091959.3; RBM26; RBM27
Unique Gene ID
Cirobu.g00003779
Gene Model ID
KH2012:KH.C14.35
Location
KhC14:2883837..2898038
Transcript Models and Sequences
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000003516 |
| NCBI Reference Sequence | NM_001078440.1 |
Gateway full ORF
2 results
cien52997
Plate: VES78_I14
cien197230
Plate: VES100_N21
Gene collection 1 (N. Satoh)
2 results
cieg055p23
Plate: R1CiGC24b17
cieg095e11
Plate: R1CiGC40f12
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| Znf_CCCH | SMART | Zinc finger, CCCH-type |
| RRM_dom | Pfam | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| Znf_CCCH_sf | SUPERFAMILY | Zinc finger, CCCH-type superfamily |
| PWI_dom | Pfam | PWI domain |
| Znf_CCCH | ProSiteProfiles | Zinc finger, CCCH-type |
| RRM_dom | SMART | RNA recognition motif domain |
GOSlim
9 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Orthology | molecular function |
| RNA binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| mRNA processing | Orthology | biological process |
| nuclear speck | Orthology | cellular component |
| metal ion binding | Orthology | molecular function |
| dephosphorylation | Orthology | biological process |
GO (Orthology)
9 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| mRNA processing | Hs | biological process |
| negative regulation of phosphatase activity | Hs | biological process |
| nuclear speck | Hs | cellular component |
| metal ion binding | Hs | molecular function |
GO (Blast)
7 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 216 | 2.71e-58 |
| RNA binding | Hs | molecular function | 216 | 2.71e-58 |
| protein binding | Hs | molecular function | 216 | 2.71e-58 |
| nucleus | Hs | cellular component | 141 | 3.70e-34 |
| cytoplasm | Hs | cellular component | 141 | 3.70e-34 |
| nuclear speck | Hs | cellular component | 141 | 3.70e-34 |
| metal ion binding | Hs | molecular function | 216 | 2.71e-58 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 5.97E-13 |
| mRNA processing | Pfam | biological process | 1.3E-9 |
| metal ion binding | SUPERFAMILY | molecular function | 3.01E-5 |
