Aniseed - Gene card

Gene 'KH2012:KH.C14.14'

Gene Card

Best human hits

USP22; USP35; USP38

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003550

Gene Model ID

KH2012:KH.C14.14

Location

KhC14:3429691..3439231

Transcript Models and Sequences

KH2012:KH.C14.14.v1.A.ND1-1
KH2012:KH.C14.14.v1.A.SL2-1
KH2012:KH.C14.14.v1.A.SL3-1
KH2012:KH.C14.14.v1.A.SL4-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000022457
NCBI Reference Sequence	XM_002124134.4
NCBI Reference Sequence	XM_018814759.1

Collections

Gateway full ORF

3 results

Gene collection 1 (N. Satoh)

2 results

cieg011k12

Plate: R1CiGC17k12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
USP_dom	ProSiteProfiles	Ubiquitin specific protease domain
Peptidase_C19_UCH	Pfam	Peptidase C19, ubiquitin carboxyl-terminal hydrolase
USP_CS	ProSitePatterns	Ubiquitin specific protease, conserved site
ARM-type_fold	SUPERFAMILY	Armadillo-type fold

GOSlim

18 results

GO Term	Annotation Origin	Type
transcription coactivator activity	Blast	molecular function
binding	Orthology	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
proteolysis	Orthology	biological process
peptidase activity	Orthology	molecular function
zinc ion binding	Blast	molecular function
nuclear speck	Blast	cellular component
hydrolase activity	Orthology	molecular function
enzyme binding	Blast	molecular function
metal ion binding	Blast	molecular function
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function
nucleoplasm part	Blast	cellular component
macromolecular complex	Blast	cellular component
organelle organization	Blast	biological process
transferase activity	Blast	molecular function
cellular protein modification process	Blast	biological process

GO (Orthology)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
thiol-dependent ubiquitin-specific protease activity	Hs	molecular function
binding	Hs	molecular function
proteolysis	Hs	biological process
ubiquitin-dependent protein catabolic process	Hs	biological process
peptidase activity	Hs	molecular function
cysteine-type peptidase activity	Hs	molecular function
protein deubiquitination	Hs	biological process
hydrolase activity	Hs	molecular function
thiol-dependent ubiquitinyl hydrolase activity	Hs	molecular function

GO (Blast)