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GENE CARD

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  1. Gene 'KH2012:KH.C13.80'

Gene Card

Best human hits

NAV1; NAV2; NAV3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003484

Gene Model ID

KH2012:KH.C13.80

Location

KhC13:500650..512362

Transcript Models and Sequences

  KH2012:KH.C13.80.v1.A.SL1-1
KH2012:KH.C13.80.v1.A.SL2-1
KH2012:KH.C13.80.v2.A.SL3-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000009447
Collections

Gene collection 1 (N. Satoh)

3 results

citb010k22

Plate: R1CiGC30k21

cieg017o02

Plate: R1CiGC18c06

citb052o11

Plate: R1CiGC45h22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
PhoH Pfam PhoH-like protein
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

33 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytoskeleton Orthology cellular component
microtubule Orthology cellular component
multicellular organism development Orthology biological process
nervous system development Orthology biological process
sensory perception of sound Orthology biological process
microtubule binding Orthology molecular function
microtubule cytoskeleton Orthology cellular component
membrane Orthology cellular component
hydrolase activity Orthology molecular function
cell differentiation Orthology biological process
microtubule-based process Orthology biological process
organelle organization Orthology biological process
cell migration Orthology biological process
generation of neurons Orthology biological process
nucleoside-triphosphatase activity Orthology molecular function
extracellular region part Orthology cellular component
membrane part Orthology cellular component
whole membrane Orthology cellular component
nuclear outer membrane-endoplasmic reticulum membrane network Orthology cellular component
nuclear membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
sensory perception Orthology biological process
anion binding Orthology molecular function
carbohydrate derivative binding Orthology molecular function
central nervous system development Orthology biological process
cell projection part Orthology cellular component
axon Orthology cellular component

GO (Orthology)

33 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
microtubule bundle formation Hs biological process
neuron migration Hs biological process
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
proteinaceous extracellular matrix Hs cellular component
interstitial matrix Hs cellular component
nucleus Hs cellular component
nuclear outer membrane Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
negative regulation of microtubule depolymerization Hs biological process
multicellular organism development Hs biological process
nervous system development Hs biological process
sensory perception of sound Hs biological process
sensory perception of smell Hs biological process
locomotory behavior Hs biological process
microtubule binding Hs molecular function
heparin binding Hs molecular function
microtubule cytoskeleton Hs cellular component
membrane Hs cellular component
hydrolase activity Hs molecular function
optic nerve development Hs biological process
glossopharyngeal nerve development Hs biological process
vagus nerve development Hs biological process
cell differentiation Hs biological process
negative regulation of cell migration Hs biological process
positive regulation of microtubule polymerization Hs biological process
axon initial segment Hs cellular component
microtubule end Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 331 2.57e-96
helicase activity Hs molecular function 331 2.57e-96
protein binding Hs molecular function 331 2.57e-96
ATP binding Hs molecular function 331 2.57e-96
proteinaceous extracellular matrix Hs cellular component 331 2.57e-96
interstitial matrix Hs cellular component 331 2.57e-96
nucleus Hs cellular component 331 2.57e-96
nuclear outer membrane Hs cellular component 315 4.93e-91
nucleoplasm Hs cellular component 331 2.57e-96
cytoplasm Hs cellular component 255 7.74e-71
cytoskeleton Hs cellular component 255 7.74e-71
microtubule Hs cellular component 255 7.74e-71
microtubule binding Hs molecular function 315 4.93e-91
heparin binding Hs molecular function 331 2.57e-96
microtubule cytoskeleton Hs cellular component 255 7.74e-71
membrane Hs cellular component 315 4.93e-91
hydrolase activity Hs molecular function 331 2.57e-96
axon initial segment Hs cellular component 255 7.74e-71
microtubule end Hs cellular component 315 4.93e-91

GO (InterProScan)

1 result

GO Term Analysis Type e-value
ATP binding Pfam molecular function 9.9E-5

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