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Gene Card

Best human hits

SP9; ZNF503; ZNF703

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003402

Gene Model ID

KH2012:KH.C13.183

Location

KhC13:152729..155781

Transcript Models and Sequences

  KH2012:KH.C13.183.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000023630
NCBI Reference Sequence XM_002130210.4
Collections

Gateway full ORF

2 results

cima811594

Plate: VES58_L03

cima872177

Plate: VES66_L21

Gene collection 1 (N. Satoh)

1 result

cieg026d23

Plate: R1CiGC19b18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type

GOSlim

27 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleic acid binding Orthology molecular function
DNA binding Blast molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
positive regulation of cell proliferation Orthology biological process
negative regulation of cell proliferation Orthology biological process
negative regulation of gene expression Orthology biological process
macromolecular complex Orthology cellular component
negative regulation of transcription, DNA-templated Orthology biological process
metal ion binding Orthology molecular function
regulation of canonical Wnt signaling pathway Orthology biological process
animal organ development Orthology biological process
cell differentiation Orthology biological process
nuclear lumen Orthology cellular component
cell surface receptor signaling pathway Orthology biological process
regulation of signal transduction Orthology biological process
cellular response to organic substance Orthology biological process
cell migration Orthology biological process
cell adhesion Orthology biological process
cell cycle Orthology biological process
cell proliferation Orthology biological process
transcription factor binding Orthology molecular function
response to lipid Orthology biological process

GO (Orthology)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleic acid binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
positive regulation of cell proliferation Hs biological process
negative regulation of cell proliferation Hs biological process
negative regulation of gene expression Hs biological process
positive regulation of epithelial to mesenchymal transition Hs biological process
nuclear matrix Hs cellular component
regulation of transforming growth factor beta receptor signaling pathway Hs biological process
positive regulation of cell migration Hs biological process
macromolecular complex Hs cellular component
negative regulation of homotypic cell-cell adhesion Hs biological process
adherens junction assembly Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
metal ion binding Hs molecular function
regulation of cell cycle Hs biological process
regulation of canonical Wnt signaling pathway Hs biological process
neural precursor cell proliferation Hs biological process
repressing transcription factor binding Hs molecular function
cellular response to estradiol stimulus Hs biological process

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 42.7 2.87e-04
nucleic acid binding Hs molecular function 80.9 1.96e-16
DNA binding Hs molecular function 42.7 2.87e-04
protein binding Hs molecular function 78.2 1.35e-15
nucleus Hs cellular component 80.9 1.96e-16
cytoplasm Hs cellular component 78.2 1.35e-15
nuclear matrix Hs cellular component 78.2 1.35e-15
macromolecular complex Hs cellular component 78.2 1.35e-15
metal ion binding Hs molecular function 80.9 1.96e-16
repressing transcription factor binding Hs molecular function 78.2 1.35e-15

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding ProSiteProfiles molecular function 9.993

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