Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000014557
ENSEMBL	ENSCING00000024184
NCBI Reference Sequence	XM_018814638.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg008l03

Plate: R1CiGC16h18

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Zinc_finger_PHD-type_CS	ProSitePatterns	Zinc finger, PHD-type, conserved site
Znf_PHD-finger	ProSiteProfiles	Zinc finger, PHD-finger
Mtf2_C_dom	Pfam	Polycomb-like MTF2 factor 2, C-terminal domain
Znf_FYVE_PHD	SUPERFAMILY	Zinc finger, FYVE/PHD-type
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
Tudor	SMART	Tudor domain
Znf_PHD-finger	Pfam	Zinc finger, PHD-finger
Znf_PHD	SMART	Zinc finger, PHD-type

GOSlim

29 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
centrosome	Orthology	cellular component
microtubule organizing center	Orthology	cellular component
cytoskeleton	Orthology	cellular component
focal adhesion	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
organelle organization	Orthology	biological process
multicellular organism development	Orthology	biological process
developmental process	Orthology	biological process
regulation of cellular metabolic process	Orthology	biological process
cellular protein modification process	Orthology	biological process
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
negative regulation of gene expression	Orthology	biological process
cell differentiation	Orthology	biological process

GO (Orthology)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
centrosome	Hs	cellular component
microtubule organizing center	Hs	cellular component
cytoskeleton	Hs	cellular component
focal adhesion	Hs	cellular component
chromatin organization	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
segment specification	Hs	biological process
stem cell population maintenance	Hs	biological process
regulation of histone methylation	Hs	biological process
methylated histone binding	Hs	molecular function
ESC/E(Z) complex	Hs	cellular component
site of double-strand break	Hs	cellular component
negative regulation of gene expression, epigenetic	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
stem cell differentiation	Hs	biological process
negative regulation of histone H3-K27 methylation	Hs	biological process

GO (Blast)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	371	6.64e-120
DNA binding	Hs	molecular function	371	6.64e-120
chromatin binding	Hs	molecular function	305	8.45e-95
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	305	8.45e-95
protein binding	Hs	molecular function	325	2.73e-102
nucleus	Hs	cellular component	371	6.64e-120
nucleoplasm	Hs	cellular component	371	6.64e-120
cytoplasm	Hs	cellular component	371	6.64e-120
centrosome	Hs	cellular component	305	8.45e-95
microtubule organizing center	Hs	cellular component	305	8.45e-95
cytoskeleton	Hs	cellular component	305	8.45e-95
focal adhesion	Hs	cellular component	371	6.64e-120
methylated histone binding	Hs	molecular function	371	6.64e-120
ESC/E(Z) complex	Hs	cellular component	371	6.64e-120
site of double-strand break	Hs	cellular component	305	8.45e-95
metal ion binding	Hs	molecular function	371	6.64e-120

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences