Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000001563
NCBI Reference Sequence	NM_001078396.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg052o01

Plate: R1CiGC23p02

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_type	SMART	Zinc finger C2H2-type
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily

GOSlim

27 results

GO Term	Annotation Origin	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Blast	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcription coactivator activity	Orthology	molecular function
protein binding	Blast	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component
Golgi apparatus	Blast	cellular component
cytosol	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
axonogenesis	Orthology	biological process
axon guidance	Orthology	biological process
transcription factor binding	Blast	molecular function
zinc ion binding	Orthology	molecular function
intracellular membrane-bounded organelle	Blast	cellular component
sequence-specific DNA binding	Blast	molecular function
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
cell morphogenesis involved in neuron differentiation	Orthology	biological process
neuron projection morphogenesis	Orthology	biological process

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription coactivator activity	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
axonogenesis	Hs	biological process
axon guidance	Hs	biological process
zinc ion binding	Hs	molecular function
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
dendrite morphogenesis	Hs	biological process

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	248	3.64e-81
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	181	1.92e-53
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	248	3.64e-81
fibrillar center	Hs	cellular component	176	1.09e-53
nucleic acid binding	Hs	molecular function	248	3.64e-81
DNA binding	Hs	molecular function	248	3.64e-81
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	248	3.64e-81
transcription coactivator activity	Hs	molecular function	248	3.64e-81
protein binding	Hs	molecular function	181	1.92e-53
nucleus	Hs	cellular component	248	3.64e-81
nucleoplasm	Hs	cellular component	181	1.92e-53
nucleolus	Hs	cellular component	176	1.09e-53
Golgi apparatus	Hs	cellular component	181	1.92e-53
cytosol	Hs	cellular component	176	1.09e-53
transcription factor binding	Hs	molecular function	181	1.92e-53
zinc ion binding	Hs	molecular function	248	3.64e-81
intracellular membrane-bounded organelle	Hs	cellular component	181	1.92e-53
sequence-specific DNA binding	Hs	molecular function	181	1.92e-53
metal ion binding	Hs	molecular function	248	3.64e-81

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	7.1E-5

Gene Card

Best human hits

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Transcript Models and Sequences