- Gene 'KH2012:KH.C12.8'
Gene Card
Best human hits
DEAF1; SAMD11; SAMD7
Unique Gene ID
Cirobu.g00003288
Gene Model ID
KH2012:KH.C12.8
Location
KhC12:3425836..3444946
Transcript Models and Sequences
KH2012:KH.C12.8.v1.A.SL3-1
KH2012:KH.C12.8.v2.C.ND2-1
KH2012:KH.C12.8.v3.A.nonSL5-1
KH2012:KH.C12.8.v3.A.SL1-1
KH2012:KH.C12.8.v4.A.SL4-1
External database links
6 results
Gene collection 1 (N. Satoh)
2 results
citb1h15
Plate: R1CiGC28h13
citb030j02
Plate: R1CiGC31j13
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
10 results
| IPR Term | Analysis | Definition |
|---|---|---|
| SAM | ProSiteProfiles | Sterile alpha motif domain |
| SAM | Pfam | Sterile alpha motif domain |
| SAM/pointed_sf | SUPERFAMILY | Sterile alpha motif/pointed domain superfamily |
| SAM | SMART | Sterile alpha motif domain |
| SAND_dom | ProSiteProfiles | SAND domain |
| GMEB1/2 | PANTHER | Glucocorticoid modulatory element-binding protein 1/2 |
| SAND-like_dom_sf | SUPERFAMILY | SAND-like domain superfamily |
| SAND-like_dom_sf | Gene3D | SAND-like domain superfamily |
| SAND_dom | SMART | SAND domain |
| SAND_dom | Pfam | SAND domain |
GOSlim
15 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| negative regulation of transcription from RNA polymerase II promoter | Blast | biological process |
| RNA polymerase II regulatory region sequence-specific DNA binding | Blast | molecular function |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| DNA binding | Orthology | molecular function |
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| protein binding | Orthology | molecular function |
| extracellular region | Blast | cellular component |
| nucleus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| negative regulation of gene expression | Orthology | biological process |
| metal ion binding | Blast | molecular function |
| transcription coactivator activity | InterProScan | molecular function |
| nucleolus | Blast | cellular component |
| intracellular part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
GO (Orthology)
5 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| DNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| negative regulation of gene expression | Hs | biological process |
GO (Blast)
12 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II regulatory region sequence-specific DNA binding | Hs | molecular function | 70.1 | 3.07e-12 |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 70.1 | 3.07e-12 |
| transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding | Hs | molecular function | 70.1 | 3.07e-12 |
| fibrillar center | Hs | cellular component | 70.1 | 3.07e-12 |
| DNA binding | Hs | molecular function | 77.8 | 1.71e-14 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 70.1 | 3.07e-12 |
| protein binding | Hs | molecular function | 77.8 | 1.71e-14 |
| extracellular region | Hs | cellular component | 70.1 | 3.07e-12 |
| nucleus | Hs | cellular component | 77.8 | 1.71e-14 |
| transcription factor complex | Hs | cellular component | 70.1 | 3.07e-12 |
| cytoplasm | Hs | cellular component | 70.1 | 3.07e-12 |
| metal ion binding | Hs | molecular function | 70.1 | 3.07e-12 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| DNA binding | SMART | molecular function | 1.6E-23 |
| protein binding | Pfam | molecular function | 2.1E-13 |
| nucleus | PANTHER | cellular component | 1.5E-61 |
| transcription coactivator activity | PANTHER | molecular function | 1.5E-61 |
