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GENE CARD

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  1. Gene 'Cisavi.CG.ENS81.R1.3...' > 
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  3. Gene 'Phfumi.CG.MTP2014.S3...' > 
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Gene Card

Best human hits

MTSS1; MTSS1L

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003135

Gene Model ID

KH2012:KH.C12.568

Location

KhC12:3947990..3968426

Transcript Models and Sequences

  KH2012:KH.C12.568.v1.B.SL1-1
KH2012:KH.C12.568.v2.R.ND2-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

2 results

cima830461

Plate: VES61_F23

cien131127

Plate: VES90_M21

Gene collection 1 (N. Satoh)

2 results

ciad002b06

Plate: R1CiGC01g23

cieg006e10

Plate: R1CiGC16k02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
I-BAR_dom ProSiteProfiles IMD/I-BAR domain
I-BAR_dom Pfam IMD/I-BAR domain
AH/BAR_dom_sf Gene3D AH/BAR domain superfamily
AH/BAR_dom_sf SUPERFAMILY AH/BAR domain superfamily
MIM/ABBA PANTHER I-BAR domain containing protein MIM/ABBA

GOSlim

27 results

GO Term Annotation Origin Type
actin binding Orthology molecular function
GTPase activator activity Orthology molecular function
receptor binding Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
cytoskeleton Orthology cellular component
plasma membrane Orthology cellular component
cell adhesion Orthology biological process
lamellipodium Orthology cellular component
identical protein binding Orthology molecular function
cell projection Orthology cellular component
membrane organization Orthology biological process
plasma membrane region Orthology cellular component
cell leading edge Orthology cellular component
anion binding Orthology molecular function
cell surface receptor signaling pathway Orthology biological process
organelle organization Orthology biological process
cytoplasmic vesicle Orthology cellular component
cell periphery Orthology cellular component
cytoplasmic part Orthology cellular component
cytoskeletal part Orthology cellular component
cell projection membrane Orthology cellular component
enzyme binding Orthology molecular function
negative regulation of cell proliferation Orthology biological process
cellular response to stress Orthology biological process
positive regulation of GTPase activity Orthology biological process
cell projection assembly Orthology biological process

GO (Orthology)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
ruffle Hs cellular component
actin binding Hs molecular function
actin monomer binding Hs molecular function
GTPase activator activity Hs molecular function
receptor binding Hs molecular function
protein binding Hs molecular function
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function
cytoplasm Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
plasma membrane organization Hs biological process
cell adhesion Hs biological process
transmembrane receptor protein tyrosine kinase signaling pathway Hs biological process
actin cytoskeleton Hs cellular component
lamellipodium Hs cellular component
actin cytoskeleton organization Hs biological process
endocytic vesicle Hs cellular component
cortical actin cytoskeleton Hs cellular component
ruffle membrane Hs cellular component
identical protein binding Hs molecular function
cell projection Hs cellular component
Rac GTPase binding Hs molecular function
negative regulation of epithelial cell proliferation Hs biological process
membrane organization Hs biological process
cellular response to fluid shear stress Hs biological process
activation of GTPase activity Hs biological process
ruffle assembly Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ruffle Hs cellular component 327 1.48e-99
actin binding Hs molecular function 327 1.48e-99
actin monomer binding Hs molecular function 327 1.48e-99
GTPase activator activity Hs molecular function 291 1.82e-86
receptor binding Hs molecular function 327 1.48e-99
protein binding Hs molecular function 327 1.48e-99
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function 291 1.82e-86
cytoplasm Hs cellular component 327 1.48e-99
cytoskeleton Hs cellular component 327 1.48e-99
plasma membrane Hs cellular component 291 1.82e-86
actin cytoskeleton Hs cellular component 327 1.48e-99
lamellipodium Hs cellular component 291 1.82e-86
endocytic vesicle Hs cellular component 327 1.48e-99
cortical actin cytoskeleton Hs cellular component 291 1.82e-86
ruffle membrane Hs cellular component 291 1.82e-86
identical protein binding Hs molecular function 327 1.48e-99
cell projection Hs cellular component 291 1.82e-86
Rac GTPase binding Hs molecular function 291 1.82e-86

GO (InterProScan)

2 results

GO Term Analysis Type e-value
actin binding PANTHER molecular function 7.5E-81
plasma membrane organization Pfam biological process 2.0E-66

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