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GENE CARD

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  1. Gene 'KH2012:KH.C4.429' > 
  2. Gene 'KH2012:KH.C12.379'

Gene Card

Best human hits

SLC6A1; SLC6A12; SLC6A13

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002929

Gene Model ID

KH2012:KH.C12.379

Location

KhC12:4527845..4533677

Transcript Models and Sequences

  KH2012:KH.C12.379.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000009409
Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Na/ntran_symport Pfam Sodium:neurotransmitter symporter
SNS_sf SUPERFAMILY Sodium:neurotransmitter symporter superfamily
Na/ntran_symport PRINTS Sodium:neurotransmitter symporter
Na/ntran_symport ProSiteProfiles Sodium:neurotransmitter symporter
Na/ntran_symport PANTHER Sodium:neurotransmitter symporter

GOSlim

14 results

GO Term Annotation Origin Type
protein binding Blast molecular function
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
axon Blast cellular component
neuron projection Blast cellular component
metal ion binding Blast molecular function
transmembrane transport Blast biological process
extracellular exosome Blast cellular component
sodium ion transport Blast biological process
organic substance transport Blast biological process
ion transport Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
transporter activity Hs molecular function 398 7.62e-132
neurotransmitter:sodium symporter activity Hs molecular function 404 2.51e-134
gamma-aminobutyric acid:sodium symporter activity Hs molecular function 404 2.51e-134
protein binding Hs molecular function 391 2.91e-129
plasma membrane Hs cellular component 404 2.51e-134
integral component of plasma membrane Hs cellular component 404 2.51e-134
cell surface Hs cellular component 404 2.51e-134
amino acid transmembrane transporter activity Hs molecular function 391 2.91e-129
symporter activity Hs molecular function 404 2.51e-134
membrane Hs cellular component 404 2.51e-134
integral component of membrane Hs cellular component 404 2.51e-134
axon Hs cellular component 404 2.51e-134
neuron projection Hs cellular component 404 2.51e-134
metal ion binding Hs molecular function 404 2.51e-134
extracellular exosome Hs cellular component 398 7.62e-132

GO (InterProScan)

3 results

GO Term Analysis Type e-value
neurotransmitter:sodium symporter activity PANTHER molecular function 1.8E-200
neurotransmitter transport PANTHER biological process 1.8E-200
integral component of membrane PANTHER cellular component 1.8E-200

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