Aniseed - Gene card

Gene Card

Best human hits

SLC2A6; SLC2A8

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002789

Gene Model ID

KH2012:KH.C12.251

Location

KhC12:739917..746084

Transcript Models and Sequences

KH2012:KH.C12.251.v1.A.nonSL2-1
KH2012:KH.C12.251.v1.A.nonSL3-1
KH2012:KH.C12.251.v1.A.nonSL5-1
KH2012:KH.C12.251.v1.A.nonSL6-1
KH2012:KH.C12.251.v1.A.SL4-1
KH2012:KH.C12.251.v1.R.ND1-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000000888
ENSEMBL	ENSCING00000021373
NCBI Reference Sequence	XM_002129467.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg005h11

Plate: R1CiGC16a14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
MFS_sugar_transport-like	Pfam	Major facilitator, sugar transporter-like
Sugar_transporter_CS	ProSitePatterns	Sugar transporter, conserved site
MFS_trans_sf	SUPERFAMILY	MFS transporter superfamily
Sugar/inositol_transpt	TIGRFAM	Sugar/inositol transporter
MFS_dom	CDD	Major facilitator superfamily domain
Sugar/inositol_transpt	PRINTS	Sugar/inositol transporter
MFS_dom	ProSiteProfiles	Major facilitator superfamily domain

GOSlim

25 results

GO Term	Annotation Origin	Type
lysosomal membrane	Blast	cellular component
plasma membrane	Orthology	cellular component
integral component of plasma membrane	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
cytoplasmic vesicle	Blast	cellular component
transmembrane transport	Orthology	biological process
transmembrane signaling receptor activity	Orthology	molecular function
protein binding	Orthology	molecular function
vacuole	Orthology	cellular component
vacuolar membrane	Orthology	cellular component
ion transport	Orthology	biological process
signal transduction	Orthology	biological process
cellular process	Orthology	biological process
cell	Orthology	cellular component
organic substance transport	Orthology	biological process
organelle membrane	Orthology	cellular component
monovalent inorganic cation transport	Blast	biological process
small molecule binding	Blast	molecular function
synapse part	Blast	cellular component
endomembrane system	Blast	cellular component
neuron part	Blast	cellular component
intracellular organelle part	Blast	cellular component
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
transporter activity	Hs	molecular function
plasma membrane	Hs	cellular component
integral component of plasma membrane	Hs	cellular component
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
transmembrane transporter activity	Hs	molecular function
transmembrane transport	Hs	biological process
transmembrane signaling receptor activity	Hs	molecular function
protein binding	Hs	molecular function
vacuole	Hs	cellular component
vacuolar membrane	Hs	cellular component
ion transport	Hs	biological process
cellular iron ion homeostasis	Hs	biological process
signal transduction	Hs	biological process
organic anion transmembrane transporter activity	Hs	molecular function
organic anion transport	Hs	biological process
integral component of organelle membrane	Hs	cellular component
iron ion homeostasis	Hs	biological process

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transporter activity	Hs	molecular function	231	5.60e-70
sugar:proton symporter activity	Hs	molecular function	231	5.60e-70
glucose transmembrane transporter activity	Hs	molecular function	231	5.60e-70
glucose binding	Hs	molecular function	231	5.60e-70
lysosomal membrane	Hs	cellular component	231	5.60e-70
plasma membrane	Hs	cellular component	231	5.60e-70
integral component of plasma membrane	Hs	cellular component	231	5.60e-70
synaptic vesicle	Hs	cellular component	231	5.60e-70
membrane	Hs	cellular component	231	5.60e-70
integral component of membrane	Hs	cellular component	231	5.60e-70
transmembrane transporter activity	Hs	molecular function	231	5.60e-70
cytoplasmic vesicle membrane	Hs	cellular component	231	5.60e-70
clathrin-coated vesicle membrane	Hs	cellular component	231	5.60e-70
cytoplasmic vesicle	Hs	cellular component	231	5.60e-70
D-glucose transmembrane transporter activity	Hs	molecular function	231	5.60e-70

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
transporter activity	ProSitePatterns	molecular function
membrane	TIGRFAM	cellular component	3.2E-78
transmembrane transporter activity	Pfam	molecular function	4.1E-82
transmembrane transport	Pfam	biological process	4.1E-82