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GENE CARD

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Gene Card

Best human hits

TRIM2; TRIM3; TRIM71

Unique Gene ID

Cirobu.g00002786

Gene Model ID

KH2012:KH.C12.249

Location

KhC12:1212292..1218270

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000011251
Collections

Gateway full ORF

1 result

cima823533

Plate: VES60_P13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
NHL_repeat_subgr ProSiteProfiles NHL repeat, subgroup
6-blade_b-propeller_TolB-like Gene3D Six-bladed beta-propeller, TolB-like

GOSlim

17 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
ubiquitin-protein transferase activity Blast molecular function
protein binding Blast molecular function
intracellular Blast cellular component
cytoplasm Blast cellular component
endosome Blast cellular component
early endosome Blast cellular component
Golgi apparatus Blast cellular component
protein C-terminus binding Blast molecular function
zinc ion binding Blast molecular function
transferase activity Blast molecular function
cell projection Blast cellular component
metal ion binding Blast molecular function
cytoplasmic part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component
negative regulation of gene expression Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 50.4 3.91e-07
RNA binding Hs molecular function 50.4 3.91e-07
ubiquitin-protein transferase activity Hs molecular function 53.1 5.14e-08
protein binding Hs molecular function 53.1 5.14e-08
intracellular Hs cellular component 53.1 5.14e-08
cytoplasm Hs cellular component 53.1 5.14e-08
endosome Hs cellular component 53.1 5.14e-08
early endosome Hs cellular component 53.1 5.14e-08
Golgi apparatus Hs cellular component 53.1 5.14e-08
protein C-terminus binding Hs molecular function 53.1 5.14e-08
zinc ion binding Hs molecular function 53.1 5.14e-08
transferase activity Hs molecular function 52.4 7.90e-08
translation repressor activity Hs molecular function 50.4 3.91e-07
dendrite Hs cellular component 53.1 5.14e-08
miRNA binding Hs molecular function 50.4 3.91e-07
cell projection Hs cellular component 53.1 5.14e-08
metal ion binding Hs molecular function 53.1 5.14e-08
ubiquitin protein ligase activity Hs molecular function 53.1 5.14e-08

GO (InterProScan)

No result

GO Term Analysis Type e-value