Gene Card
Best human hits
MATR3; RBM20
Unique Gene ID
Cirobu.g00002698
Gene Model ID
KH2012:KH.C12.169
Location
KhC12:3796626..3807092
Transcript Models and Sequences
KH2012:KH.C12.169.v1.A.SL2-1
KH2012:KH.C12.169.v1.R.ND1-1
KH2012:KH.C12.169.v2.A.SL2-2
External database links
3 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000014154 |
| ENSEMBL | ENSCING00000020417 |
| NCBI Reference Sequence | XM_018814353.1 |
Gateway full ORF
2 results
cien123322
Plate: VES89_L13
cien215255
Plate: VES103_P17
Gene collection 1 (N. Satoh)
1 result
ciad038d14
Plate: R1CiGC04a10
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Matrin/U1-like-C_Znf_C2H2 | SMART | Matrin/U1-C-like, C2H2-type zinc finger |
| CIZ1 | PANTHER | Cip1-interacting zinc finger protein |
| Znf_C2H2_sf | SUPERFAMILY | Zinc finger C2H2 superfamily |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| Matrin/U1-C_Znf_C2H2 | ProSiteProfiles | Matrin/U1-C, C2H2-type zinc finger |
GOSlim
12 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| structural molecule activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| zinc ion binding | Blast | molecular function |
| membrane | Blast | cellular component |
| identical protein binding | Blast | molecular function |
| metal ion binding | Blast | molecular function |
| organelle inner membrane | Blast | cellular component |
| nuclear membrane | Blast | cellular component |
| nuclear lumen | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
12 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 63.9 | 4.92e-10 |
| RNA binding | Hs | molecular function | 63.9 | 4.92e-10 |
| structural molecule activity | Hs | molecular function | 63.9 | 4.97e-10 |
| protein binding | Hs | molecular function | 63.9 | 4.97e-10 |
| nucleus | Hs | cellular component | 63.9 | 4.92e-10 |
| nuclear inner membrane | Hs | cellular component | 63.9 | 4.97e-10 |
| zinc ion binding | Hs | molecular function | 63.9 | 4.92e-10 |
| membrane | Hs | cellular component | 63.9 | 4.97e-10 |
| nuclear matrix | Hs | cellular component | 63.9 | 4.97e-10 |
| miRNA binding | Hs | molecular function | 63.9 | 4.97e-10 |
| identical protein binding | Hs | molecular function | 63.9 | 4.97e-10 |
| metal ion binding | Hs | molecular function | 63.9 | 4.97e-10 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SMART | molecular function | 2.8E-6 |
| nucleus | ProSiteProfiles | cellular component | 9.283 |
| zinc ion binding | SMART | molecular function | 2.8E-6 |
