- Gene 'KH2012:KH.C12.105'
Gene Card
Best human hits
PRDM1; ZNF235; ZNF683
Unique Gene ID
Cirobu.g00002629
Gene Model ID
KH2012:KH.C12.105
Location
KhC12:5048584..5051518
Transcript Models and Sequences
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000004641 |
| NCBI Reference Sequence | NM_001128889.1 |
Gateway full ORF
2 results
cien39940
Plate: VES76_K17
cima873760
Plate: VES67_O09
Gene collection 1 (N. Satoh)
1 result
cicl006h24
Plate: R1CiGC09a17
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
4 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_C2H2_type | ProSitePatterns | Zinc finger C2H2-type |
| Znf_C2H2_sf | SUPERFAMILY | Zinc finger C2H2 superfamily |
| Znf_C2H2_type | ProSiteProfiles | Zinc finger C2H2-type |
| Znf_C2H2_type | SMART | Zinc finger C2H2-type |
GOSlim
16 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Blast | molecular function |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| nucleic acid binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| intracellular | Blast | cellular component |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| transferase activity | Blast | molecular function |
| sequence-specific DNA binding | Blast | molecular function |
| metal ion binding | Blast | molecular function |
| metabolic process | Blast | biological process |
| enzyme binding | Blast | molecular function |
| chromatin binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 190 | 9.58e-52 |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 190 | 9.58e-52 |
| transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding | Hs | molecular function | 190 | 9.58e-52 |
| nucleic acid binding | Hs | molecular function | 190 | 9.58e-52 |
| DNA binding | Hs | molecular function | 190 | 9.58e-52 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 190 | 9.58e-52 |
| protein binding | Hs | molecular function | 190 | 9.58e-52 |
| intracellular | Hs | cellular component | 112 | 5.55e-26 |
| nucleus | Hs | cellular component | 190 | 9.58e-52 |
| nucleoplasm | Hs | cellular component | 190 | 9.58e-52 |
| cytoplasm | Hs | cellular component | 190 | 9.58e-52 |
| methyltransferase activity | Hs | molecular function | 190 | 9.58e-52 |
| transferase activity | Hs | molecular function | 190 | 9.58e-52 |
| histone deacetylase binding | Hs | molecular function | 190 | 9.58e-52 |
| sequence-specific DNA binding | Hs | molecular function | 190 | 9.58e-52 |
| metal ion binding | Hs | molecular function | 190 | 9.58e-52 |
| promoter-specific chromatin binding | Hs | molecular function | 190 | 9.58e-52 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SMART | molecular function | 2.5E-4 |
