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GENE CARD

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  1. Gene 'KH2012:KH.C11.653'

Gene Card

Best human hits

DPF2; KAT6A; KAT6B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002504

Gene Model ID

KH2012:KH.C11.653

Location

KhC11:533602..537037

Transcript Models and Sequences

  KH2012:KH.C11.653.v1.A.ND2-1
KH2012:KH.C11.653.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000017065
NCBI Reference Sequence NM_001078452.1
Collections

Gateway full ORF

4 results

cima832238

Plate: VES62_F07

cien165178

Plate: VES95_P21

cien181631

Plate: VES98_O05

cien197159

Plate: VES100_C22

Gene collection 1 (N. Satoh)

1 result

cicl017k20

Plate: R1CiGC10h03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Zinc_finger_PHD-type_CS ProSitePatterns Zinc finger, PHD-type, conserved site
SAM/pointed_sf SUPERFAMILY Sterile alpha motif/pointed domain superfamily
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
SAM Pfam Sterile alpha motif domain
Znf_PHD SMART Zinc finger, PHD-type
Znf_FYVE_PHD SUPERFAMILY Zinc finger, FYVE/PHD-type
Znf_PHD-finger ProSiteProfiles Zinc finger, PHD-finger
Znf_PHD-finger Pfam Zinc finger, PHD-finger

GOSlim

26 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
transcription coactivator activity Blast molecular function
protein binding Orthology molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
centrosome Blast cellular component
cytosol Blast cellular component
transcription factor binding Blast molecular function
zinc ion binding Blast molecular function
nuclear speck Blast cellular component
transferase activity Blast molecular function
intracellular membrane-bounded organelle Blast cellular component
metal ion binding Blast molecular function
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component
nuclear lumen Blast cellular component
organelle organization Blast biological process
cellular protein modification process Blast biological process
nuclear body Blast cellular component
nucleoplasm part Blast cellular component

GO (Orthology)

1 result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleosome Hs cellular component 109 4.28e-27
nuclear chromatin Hs cellular component 108 1.85e-27
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 108 1.85e-27
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 108 1.85e-27
nucleic acid binding Hs molecular function 108 1.85e-27
DNA binding Hs molecular function 109 4.28e-27
transcription coactivator activity Hs molecular function 109 4.28e-27
histone acetyltransferase activity Hs molecular function 109 4.28e-27
protein binding Hs molecular function 109 4.28e-27
nucleus Hs cellular component 109 4.28e-27
nucleoplasm Hs cellular component 109 4.28e-27
nucleolus Hs cellular component 109 4.28e-27
cytoplasm Hs cellular component 108 1.85e-27
centrosome Hs cellular component 108 1.85e-27
cytosol Hs cellular component 109 4.28e-27
transcription factor binding Hs molecular function 109 4.28e-27
zinc ion binding Hs molecular function 109 4.28e-27
acetyltransferase activity Hs molecular function 109 4.28e-27
PML body Hs cellular component 109 4.28e-27
nuclear speck Hs cellular component 109 4.28e-27
transferase activity Hs molecular function 109 4.28e-27
transferase activity, transferring acyl groups Hs molecular function 109 4.28e-27
intracellular membrane-bounded organelle Hs cellular component 108 1.85e-27
metal ion binding Hs molecular function 109 4.28e-27
MOZ/MORF histone acetyltransferase complex Hs cellular component 109 4.28e-27

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 2.7E-6

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