Aniseed - Gene card

Gene 'KH2012:KH.C11.596'

Gene Card

Best human hits

SLC13A2; SLC13A3; SLC13A5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002441

Gene Model ID

KH2012:KH.C11.596

Location

KhC11:876675..884007

Transcript Models and Sequences

KH2012:KH.C11.596.v1.A.ND1-1
KH2012:KH.C11.596.v2.A.SL2-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000020016
NCBI Reference Sequence	XM_009861813.2
NCBI Reference Sequence	XM_018814088.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl058m17

Plate: R1CiGC15c21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
SLC13A/DASS	Pfam	Solute carrier family 13

GOSlim

9 results

GO Term	Annotation Origin	Type
plasma membrane	Orthology	cellular component
integral component of plasma membrane	Orthology	cellular component
ion transport	Orthology	biological process
sodium ion transport	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
transmembrane transport	Orthology	biological process
extracellular exosome	Orthology	cellular component
organic substance transport	Orthology	biological process

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
transporter activity	Hs	molecular function
plasma membrane	Hs	cellular component
integral component of plasma membrane	Hs	cellular component
ion transport	Hs	biological process
sodium ion transport	Hs	biological process
dicarboxylic acid transport	Hs	biological process
citrate transmembrane transporter activity	Hs	molecular function
succinate transmembrane transporter activity	Hs	molecular function
tricarboxylic acid transmembrane transporter activity	Hs	molecular function
symporter activity	Hs	molecular function
low-affinity sodium:dicarboxylate symporter activity	Hs	molecular function
high-affinity sodium:dicarboxylate symporter activity	Hs	molecular function
succinate transport	Hs	biological process
citrate transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
sodium:dicarboxylate symporter activity	Hs	molecular function
transmembrane transport	Hs	biological process
extracellular exosome	Hs	cellular component
succinate transmembrane transport	Hs	biological process
anion transmembrane transport	Hs	biological process
secondary active sulfate transmembrane transporter activity	Hs	molecular function
sulfate transport	Hs	biological process
sodium:sulfate symporter activity	Hs	molecular function
sodium ion transmembrane transport	Hs	biological process
sulfate transmembrane transport	Hs	biological process

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transporter activity	Hs	molecular function	468	4.84e-159
plasma membrane	Hs	cellular component	468	4.84e-159
integral component of plasma membrane	Hs	cellular component	468	4.84e-159
citrate transmembrane transporter activity	Hs	molecular function	468	4.84e-159
succinate transmembrane transporter activity	Hs	molecular function	468	4.84e-159
tricarboxylic acid transmembrane transporter activity	Hs	molecular function	468	4.84e-159
symporter activity	Hs	molecular function	468	4.84e-159
low-affinity sodium:dicarboxylate symporter activity	Hs	molecular function	448	2.77e-150
high-affinity sodium:dicarboxylate symporter activity	Hs	molecular function	451	4.23e-152
membrane	Hs	cellular component	468	4.84e-159
integral component of membrane	Hs	cellular component	468	4.84e-159
sodium:dicarboxylate symporter activity	Hs	molecular function	468	4.84e-159
extracellular exosome	Hs	cellular component	451	4.23e-152

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
transporter activity	Pfam	molecular function	4.0E-106
sodium ion transport	Pfam	biological process	4.0E-106
membrane	Pfam	cellular component	4.0E-106
transmembrane transport	Pfam	biological process	4.0E-106