Aniseed - Gene card

Gene 'KH2012:KH.C11.577'

Gene Card

Best human hits

RGS19; RGS4; RGS8

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002420

Gene Model ID

KH2012:KH.C11.577

Location

KhC11:4566236..4570678

Transcript Models and Sequences

KH2012:KH.C11.577.v1.A.SL1-1
KH2012:KH.C11.577.v2.A.nonSL3-1
KH2012:KH.C11.577.v2.A.nonSL4-1
KH2012:KH.C11.577.v2.R.ND2-1

External Database Gene Card

External database links

5 results

Database	Gene ID
ENSEMBL	ENSCING00000022939
ENSEMBL	ENSCING00000023211
NCBI Reference Sequence	XM_002121559.3
NCBI Reference Sequence	XM_018813940.1
NCBI Reference Sequence	XR_001974940.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cinc027c08

Plate: R1CiGC45k24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
RGS_sf	SUPERFAMILY	RGS domain superfamily
RGS	SMART	RGS domain
RGS	PRINTS	RGS domain
RGS	ProSiteProfiles	RGS domain
RGS	Pfam	RGS domain

GOSlim

25 results

GO Term	Annotation Origin	Type
GTPase activator activity	Orthology	molecular function
protein binding	Orthology	molecular function
calmodulin binding	Blast	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
Golgi apparatus	Blast	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
brush border	Blast	cellular component
G-protein coupled receptor signaling pathway	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
membrane	Orthology	cellular component
cytoplasmic vesicle	Blast	cellular component
cell projection	Blast	cellular component
positive regulation of GTPase activity	Orthology	biological process
membrane raft	Blast	cellular component
nucleoplasm	Orthology	cellular component
regulation of catalytic activity	Orthology	biological process
intracellular signal transduction	Orthology	biological process
protein serine/threonine kinase activity	Orthology	molecular function
regulation of signal transduction	Orthology	biological process
intracellular part	Blast	cellular component
plasma membrane part	Blast	cellular component
macromolecular complex	Blast	cellular component
neuronal cell body	Blast	cellular component

GO (Orthology)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
inactivation of MAPK activity	Hs	biological process
GTPase activator activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
regulation of G-protein coupled receptor protein signaling pathway	Hs	biological process
negative regulation of signal transduction	Hs	biological process
membrane	Hs	cellular component
positive regulation of GTPase activity	Hs	biological process
nucleoplasm	Hs	cellular component

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
G-protein alpha-subunit binding	Hs	molecular function	83.6	1.25e-17
GTPase activator activity	Hs	molecular function	83.6	1.25e-17
protein binding	Hs	molecular function	80.9	2.03e-17
calmodulin binding	Hs	molecular function	83.6	1.25e-17
nucleus	Hs	cellular component	83.6	1.25e-17
cytoplasm	Hs	cellular component	83.6	1.25e-17
Golgi apparatus	Hs	cellular component	77.4	4.16e-16
cytosol	Hs	cellular component	83.6	1.25e-17
heterotrimeric G-protein complex	Hs	cellular component	77.4	4.16e-16
plasma membrane	Hs	cellular component	83.6	1.25e-17
brush border	Hs	cellular component	77.4	4.16e-16
membrane	Hs	cellular component	83.6	1.25e-17
clathrin-coated vesicle	Hs	cellular component	77.4	4.16e-16
dendrite	Hs	cellular component	80.9	2.03e-17
extrinsic component of cytoplasmic side of plasma membrane	Hs	cellular component	80.9	2.03e-17
cytoplasmic vesicle	Hs	cellular component	77.4	4.16e-16
neuronal cell body membrane	Hs	cellular component	80.9	2.03e-17
cell projection	Hs	cellular component	80.9	2.03e-17
perikaryon	Hs	cellular component	80.9	2.03e-17
membrane raft	Hs	cellular component	77.4	4.16e-16

GO (InterProScan)