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GENE CARD

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Gene Card

Best human hits

COL12A1; COL14A1; MATN2

Unique Gene ID

Cirobu.g00002271

Gene Model ID

KH2012:KH.C11.438

Location

KhC11:3264309..3271868

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

2 results

cima8109823

Plate: VES73_N19

cima8112149

Plate: VES74_L05

Gene collection 1 (N. Satoh)

1 result

ciad020o02

Plate: R1CiGC03m23

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
VWF_A SMART von Willebrand factor, type A
VWF_A Pfam von Willebrand factor, type A
VWF_A ProSiteProfiles von Willebrand factor, type A
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily

GOSlim

12 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
endoplasmic reticulum lumen Blast cellular component
extracellular exosome Blast cellular component
extracellular vesicle Blast cellular component
extracellular region part Blast cellular component
structural molecule activity Blast molecular function
macromolecular complex binding Blast molecular function
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 118 4.27e-27
extracellular matrix structural constituent Hs molecular function 118 4.27e-27
calcium ion binding Hs molecular function 120 5.92e-28
protein binding Hs molecular function 120 5.92e-28
collagen binding Hs molecular function 118 4.27e-27
extracellular region Hs cellular component 120 5.92e-28
proteinaceous extracellular matrix Hs cellular component 120 5.92e-28
collagen trimer Hs cellular component 119 2.77e-27
collagen type XII trimer Hs cellular component 119 2.77e-27
collagen type XIV trimer Hs cellular component 118 4.27e-27
basement membrane Hs cellular component 120 5.92e-28
extracellular space Hs cellular component 120 5.92e-28
endoplasmic reticulum lumen Hs cellular component 119 2.77e-27
extracellular matrix structural constituent conferring tensile strength Hs molecular function 119 2.77e-27
protein binding, bridging Hs molecular function 118 4.27e-27
extracellular matrix Hs cellular component 120 5.92e-28
extracellular exosome Hs cellular component 119 2.77e-27
extracellular vesicle Hs cellular component 119 2.77e-27

GO (InterProScan)

No result

GO Term Analysis Type e-value