- Gene 'KH2012:KH.C11.389'
Gene Card
Best human hits
HMCN1; HMCN2; NPHS1
Unique Gene ID
Cirobu.g00002218
Gene Model ID
KH2012:KH.C11.389
Location
KhC11:3144111..3156020
Transcript Models and Sequences
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000019022 |
| ENSEMBL | ENSCING00000021682 |
Gateway full ORF
2 results
cien95357
Plate: VES85_P07
cien171309
Plate: VES96_I19
Gene collection 1 (N. Satoh)
2 results
citb034i01
Plate: R1CiGC32g11
ciht012j15
Plate: R1CiGC43o22
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
12 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Ig-like_dom_sf | SUPERFAMILY | Immunoglobulin-like domain superfamily |
| Ig_I-set | Pfam | Immunoglobulin I-set |
| FN3_dom | ProSiteProfiles | Fibronectin type III |
| FN3_dom | SMART | Fibronectin type III |
| FN3_sf | SUPERFAMILY | Fibronectin type III superfamily |
| Ig-like_fold | Gene3D | Immunoglobulin-like fold |
| Ig-like_dom | ProSiteProfiles | Immunoglobulin-like domain |
| CD80_C2-set | Pfam | CD80-like, immunoglobulin C2-set |
| FN3_dom | Pfam | Fibronectin type III |
| Ig_sub | SMART | Immunoglobulin subtype |
| FN3_dom | CDD | Fibronectin type III |
| Ig_sub2 | SMART | Immunoglobulin subtype 2 |
GOSlim
17 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| calcium ion binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| extracellular region | Blast | cellular component |
| intracellular | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| integral component of plasma membrane | Blast | cellular component |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| cell junction | Blast | cellular component |
| cell projection | Blast | cellular component |
| extracellular exosome | Blast | cellular component |
| extracellular region part | Blast | cellular component |
| cell periphery | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| cytoskeletal protein binding | Blast | molecular function |
| plasma membrane region | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
19 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| calcium ion binding | Hs | molecular function | 123 | 9.04e-28 |
| protein binding | Hs | molecular function | 224 | 3.52e-59 |
| extracellular region | Hs | cellular component | 123 | 9.04e-28 |
| proteinaceous extracellular matrix | Hs | cellular component | 123 | 9.04e-28 |
| basement membrane | Hs | cellular component | 123 | 9.04e-28 |
| intracellular | Hs | cellular component | 224 | 3.52e-59 |
| cytoplasm | Hs | cellular component | 120 | 4.68e-27 |
| plasma membrane | Hs | cellular component | 224 | 3.52e-59 |
| integral component of plasma membrane | Hs | cellular component | 224 | 3.52e-59 |
| cell cortex | Hs | cellular component | 123 | 9.04e-28 |
| membrane | Hs | cellular component | 224 | 3.52e-59 |
| integral component of membrane | Hs | cellular component | 224 | 3.52e-59 |
| myosin binding | Hs | molecular function | 224 | 3.52e-59 |
| cell junction | Hs | cellular component | 123 | 9.04e-28 |
| extracellular matrix | Hs | cellular component | 123 | 9.04e-28 |
| cleavage furrow | Hs | cellular component | 123 | 9.04e-28 |
| slit diaphragm | Hs | cellular component | 224 | 3.52e-59 |
| cell projection | Hs | cellular component | 224 | 3.52e-59 |
| extracellular exosome | Hs | cellular component | 224 | 3.52e-59 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | SUPERFAMILY | molecular function | 3.11E-19 |
