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Gene Card

Best human hits

RIPK1; RIPK3; RIPK4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002211

Gene Model ID

KH2012:KH.C11.382

Location

KhC11:144259..156253

Transcript Models and Sequences

  KH2012:KH.C11.382.v1.R.ND1-1
KH2012:KH.C11.382.v2.A.ND2-2
KH2012:KH.C11.382.v2.A.nonSL3-2
KH2012:KH.C11.382.v2.A.nonSL4-2
KH2012:KH.C11.382.v2.A.nonSL5-2
KH2012:KH.C11.382.v2.A.nonSL7-2
KH2012:KH.C11.382.v2.A.SL6-2
KH2012:KH.C11.382.v2.A.SL8-2
KH2012:KH.C11.382.v2.A.SL9-2
KH2012:KH.C11.382.v2.R.ND2-2

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000019566
Collections

Gateway full ORF

2 results

cien184521

Plate: VES98_M17

cien218169

Plate: VES104_J03

Gene collection 1 (N. Satoh)

2 results

cieg038g10

Plate: R1CiGC21l17

cibd053i02

Plate: R1CiGC38m20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

19 results

IPR Term Analysis Definition
Kelch_1 Pfam Kelch repeat type 1
Kelch-typ_b-propeller SUPERFAMILY Kelch-type beta propeller
BTB/POZ_dom Pfam BTB/POZ domain
BACK Pfam BTB/Kelch-associated
SKP1/BTB/POZ_sf SUPERFAMILY SKP1/BTB/POZ domain superfamily
Kelch-typ_b-propeller Gene3D Kelch-type beta propeller
BTB/POZ_dom SMART BTB/POZ domain
BTB-kelch_protein PIRSF BTB-kelch protein
BTB/POZ_dom ProSiteProfiles BTB/POZ domain
BACK SMART BTB/Kelch-associated
Kelch_1 SMART Kelch repeat type 1
Prot_kinase_dom Pfam Protein kinase domain
Ser/Thr_kinase_AS ProSitePatterns Serine/threonine-protein kinase, active site
Prot_kinase_dom SMART Protein kinase domain
Znf_PARP_sf Gene3D Zinc finger, PARP-type superfamily
Prot_kinase_dom ProSiteProfiles Protein kinase domain
Protein_kinase_ATP_BS ProSitePatterns Protein kinase, ATP binding site
Kinase-like_dom_sf SUPERFAMILY Protein kinase-like domain superfamily
Znf_PARP ProSiteProfiles Zinc finger, PARP-type

GOSlim

32 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
transcription coactivator activity Blast molecular function
protein kinase activity Blast molecular function
protein serine/threonine kinase activity Blast molecular function
signal transducer activity Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
intracellular Blast cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
protein phosphorylation InterProScan biological process
membrane Blast cellular component
kinase activity Blast molecular function
transferase activity Blast molecular function
ubiquitin protein ligase binding Blast molecular function
identical protein binding Blast molecular function
macromolecular complex binding Blast molecular function
membrane raft Blast cellular component
DNA binding InterProScan molecular function
zinc ion binding InterProScan molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
enzyme regulator activity Blast molecular function
intracellular signal transduction Blast biological process
receptor binding Blast molecular function
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
endosome Blast cellular component
bounding membrane of organelle Blast cellular component
plasma membrane part Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 102 7.04e-23
transcription coactivator activity Hs molecular function 92.8 6.23e-20
protein kinase activity Hs molecular function 102 7.04e-23
protein serine/threonine kinase activity Hs molecular function 102 7.04e-23
NF-kappaB-inducing kinase activity Hs molecular function 92.8 6.23e-20
signal transducer activity Hs molecular function 102 7.04e-23
death receptor binding Hs molecular function 102 7.04e-23
protein binding Hs molecular function 102 7.04e-23
ATP binding Hs molecular function 102 7.04e-23
intracellular Hs cellular component 92.8 6.23e-20
cytoplasm Hs cellular component 102 7.04e-23
mitochondrion Hs cellular component 102 7.04e-23
cytosol Hs cellular component 102 7.04e-23
plasma membrane Hs cellular component 102 7.04e-23
endosome membrane Hs cellular component 102 7.04e-23
membrane Hs cellular component 102 7.04e-23
kinase activity Hs molecular function 102 7.04e-23
transferase activity Hs molecular function 102 7.04e-23
death-inducing signaling complex Hs cellular component 102 7.04e-23
ubiquitin protein ligase binding Hs molecular function 102 7.04e-23
identical protein binding Hs molecular function 102 7.04e-23
receptor complex Hs cellular component 102 7.04e-23
macromolecular complex binding Hs molecular function 102 7.04e-23
membrane raft Hs cellular component 102 7.04e-23
death domain binding Hs molecular function 102 7.04e-23
ripoptosome Hs cellular component 102 7.04e-23

GO (InterProScan)

6 results

GO Term Analysis Type e-value
protein kinase activity Pfam molecular function 5.4E-34
protein binding Gene3D molecular function 8.2E-78
ATP binding Pfam molecular function 5.4E-34
protein phosphorylation Pfam biological process 5.4E-34
DNA binding Gene3D molecular function 1.8E-8
zinc ion binding Gene3D molecular function 1.8E-8

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