Aniseed - Gene card

Gene 'KH2012:KH.C11.234'

Gene Card

Best human hits

NDUFS8

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002051

Gene Model ID

KH2012:KH.C11.234

Location

KhC11:1000879..1002143

Transcript Models and Sequences

KH2012:KH.C11.234.v1.A.ND3-1
KH2012:KH.C11.234.v1.A.SL1-1
KH2012:KH.C11.234.v1.A.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000022203
NCBI Reference Sequence	XM_002131876.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg040l11

Plate: R1CiGC22c03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
4Fe4S_Fe-S-bd	ProSiteProfiles	4Fe-4S ferredoxin-type, iron-sulphur binding domain
NADH_quinone_OxRdtase_chainI	Hamap	NADH-quinone oxidoreductase, chain I
NADH_quinone_OxRdtase_chainI	TIGRFAM	NADH-quinone oxidoreductase, chain I
4Fe4S_Fe_S_CS	ProSitePatterns	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
4Fe4S_Fe-S-bd	Pfam	4Fe-4S ferredoxin-type, iron-sulphur binding domain

GOSlim

15 results

GO Term	Annotation Origin	Type
mitochondrion	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
response to oxidative stress	Orthology	biological process
membrane	Orthology	cellular component
metal ion binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
catalytic activity	Orthology	molecular function
membrane part	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
macromolecular complex	Orthology	cellular component
phosphorylation	Orthology	biological process
transmembrane transport	Orthology	biological process
monovalent inorganic cation transport	Orthology	biological process
organelle organization	Orthology	biological process
cofactor binding	Orthology	molecular function

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
NADH dehydrogenase activity	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial respiratory chain complex I	Hs	cellular component
mitochondrial matrix	Hs	cellular component
mitochondrial electron transport, NADH to ubiquinone	Hs	biological process
response to oxidative stress	Hs	biological process
NADH dehydrogenase (ubiquinone) activity	Hs	molecular function
membrane	Hs	cellular component
oxidoreductase activity	Hs	molecular function
oxidoreductase activity, acting on NAD(P)H	Hs	molecular function
mitochondrial respiratory chain complex I assembly	Hs	biological process
metal ion binding	Hs	molecular function
iron-sulfur cluster binding	Hs	molecular function
4 iron, 4 sulfur cluster binding	Hs	molecular function
oxidation-reduction process	Hs	biological process
respiratory chain	Hs	cellular component

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
NADH dehydrogenase activity	Hs	molecular function	315	6.85e-111
mitochondrion	Hs	cellular component	315	6.85e-111
mitochondrial respiratory chain complex I	Hs	cellular component	315	6.85e-111
mitochondrial matrix	Hs	cellular component	315	6.85e-111
NADH dehydrogenase (ubiquinone) activity	Hs	molecular function	315	6.85e-111
membrane	Hs	cellular component	315	6.85e-111
oxidoreductase activity	Hs	molecular function	315	6.85e-111
oxidoreductase activity, acting on NAD(P)H	Hs	molecular function	315	6.85e-111
metal ion binding	Hs	molecular function	315	6.85e-111
iron-sulfur cluster binding	Hs	molecular function	315	6.85e-111
4 iron, 4 sulfur cluster binding	Hs	molecular function	315	6.85e-111
respiratory chain	Hs	cellular component	315	6.85e-111

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
membrane	TIGRFAM	cellular component	2.9E-48
oxidoreductase activity, acting on NAD(P)H	TIGRFAM	molecular function	2.9E-48
4 iron, 4 sulfur cluster binding	TIGRFAM	molecular function	2.9E-48
oxidation-reduction process	TIGRFAM	biological process	2.9E-48