Aniseed - Gene card

Gene 'KH2012:KH.C11.223'

Gene Card

Best human hits

SLC13A1; SLC13A3; SLC13A5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002039

Gene Model ID

KH2012:KH.C11.223

Location

KhC11:1206645..1213208

Transcript Models and Sequences

KH2012:KH.C11.223.v1.A.ND1-1
KH2012:KH.C11.223.v2.A.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000020543
NCBI Reference Sequence	XM_018814098.1

Collections

Gene collection 1 (N. Satoh)

1 result

ciad090h17

Plate: R1CiGC37g13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
SLC13A/DASS	Pfam	Solute carrier family 13

GOSlim

9 results

GO Term	Annotation Origin	Type
plasma membrane	Orthology	cellular component
integral component of plasma membrane	Orthology	cellular component
ion transport	Orthology	biological process
sodium ion transport	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
transmembrane transport	Orthology	biological process
extracellular exosome	Orthology	cellular component
organic substance transport	Orthology	biological process

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
transporter activity	Hs	molecular function
plasma membrane	Hs	cellular component
integral component of plasma membrane	Hs	cellular component
ion transport	Hs	biological process
sodium ion transport	Hs	biological process
dicarboxylic acid transport	Hs	biological process
secondary active sulfate transmembrane transporter activity	Hs	molecular function
sulfate transport	Hs	biological process
citrate transmembrane transporter activity	Hs	molecular function
succinate transmembrane transporter activity	Hs	molecular function
tricarboxylic acid transmembrane transporter activity	Hs	molecular function
symporter activity	Hs	molecular function
high-affinity sodium:dicarboxylate symporter activity	Hs	molecular function
sodium:sulfate symporter activity	Hs	molecular function
succinate transport	Hs	biological process
citrate transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
sodium:dicarboxylate symporter activity	Hs	molecular function
sodium ion transmembrane transport	Hs	biological process
transmembrane transport	Hs	biological process
extracellular exosome	Hs	cellular component
succinate transmembrane transport	Hs	biological process
sulfate transmembrane transport	Hs	biological process
low-affinity sodium:dicarboxylate symporter activity	Hs	molecular function
anion transmembrane transport	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transporter activity	Hs	molecular function	324	2.03e-106
plasma membrane	Hs	cellular component	324	2.03e-106
integral component of plasma membrane	Hs	cellular component	324	2.03e-106
secondary active sulfate transmembrane transporter activity	Hs	molecular function	303	3.08e-98
citrate transmembrane transporter activity	Hs	molecular function	324	2.03e-106
succinate transmembrane transporter activity	Hs	molecular function	324	2.03e-106
tricarboxylic acid transmembrane transporter activity	Hs	molecular function	324	2.03e-106
symporter activity	Hs	molecular function	324	2.03e-106
high-affinity sodium:dicarboxylate symporter activity	Hs	molecular function	302	1.27e-97
sodium:sulfate symporter activity	Hs	molecular function	303	3.08e-98
membrane	Hs	cellular component	324	2.03e-106
integral component of membrane	Hs	cellular component	324	2.03e-106
sodium:dicarboxylate symporter activity	Hs	molecular function	324	2.03e-106
extracellular exosome	Hs	cellular component	302	1.27e-97

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
transporter activity	Pfam	molecular function	1.3E-63
sodium ion transport	Pfam	biological process	1.3E-63
membrane	Pfam	cellular component	1.3E-63
transmembrane transport	Pfam	biological process	1.3E-63