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GENE CARD

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Gene Card

Best human hits

GJC1; GJC2; GJD3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001971

Gene Model ID

KH2012:KH.C11.160

Location

KhC11:4828279..4831103

Transcript Models and Sequences

  KH2012:KH.C11.160.v1.A.SL2-1
KH2012:KH.C11.160.v1.R.ND1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000022678
NCBI Reference Sequence XM_002126912.3
Collections

Gateway full ORF

2 results

cima81723

Plate: VES56_B10

cima826312

Plate: VES61_L01

Gene collection 1 (N. Satoh)

2 results

cilv004i10

Plate: R1CiGC25o15

cilv019b02

Plate: R1CiGC26n07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Connexin_N Pfam Connexin, N-terminal
Connexin_CS ProSitePatterns Connexin, conserved site
Connexin PANTHER Connexin
Connexin_CCC SMART Gap junction protein, cysteine-rich domain
Connexin_N SMART Connexin, N-terminal
Connexin_N_sf Gene3D Connexin, N-terminal domain superfamily
Connexin PRINTS Connexin

GOSlim

36 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
endoplasmic reticulum membrane Orthology cellular component
plasma membrane Orthology cellular component
integral component of plasma membrane Orthology cellular component
cell communication Orthology biological process
cell-cell signaling Orthology biological process
chemical synaptic transmission Orthology biological process
brain development Orthology biological process
heart development Orthology biological process
visual perception Orthology biological process
cell surface Orthology cellular component
positive regulation of gene expression Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
cell junction Orthology cellular component
neuronal cell body Orthology cellular component
myelin sheath Orthology cellular component
cell development Orthology biological process
transmembrane transport Orthology biological process
sensory perception of sound Orthology biological process
protein homodimerization activity Orthology molecular function
blood vessel morphogenesis Orthology biological process
cell differentiation Orthology biological process
regulation of cellular metabolic process Orthology biological process
protein phosphorylation Orthology biological process
ion transport Orthology biological process
plasma membrane part Orthology cellular component
macromolecular complex Orthology cellular component
response to organic substance Orthology biological process
cell projection part Orthology cellular component
axon Orthology cellular component
signaling Orthology biological process
neuron projection Orthology cellular component
G1/S transition of mitotic cell cycle Orthology biological process
cellular process Orthology biological process
nervous system development Orthology biological process

GO (Orthology)

45 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
vasculogenesis Hs biological process
regulation of protein phosphorylation Hs biological process
ion channel activity Hs molecular function
gap junction channel activity Hs molecular function
protein binding Hs molecular function
endoplasmic reticulum membrane Hs cellular component
plasma membrane Hs cellular component
integral component of plasma membrane Hs cellular component
gap junction Hs cellular component
connexin complex Hs cellular component
muscle contraction Hs biological process
cell-cell junction assembly Hs biological process
cell communication Hs biological process
cell-cell signaling Hs biological process
chemical synaptic transmission Hs biological process
brain development Hs biological process
heart development Hs biological process
visual perception Hs biological process
response to toxic substance Hs biological process
response to glucose Hs biological process
cell surface Hs cellular component
positive regulation of gene expression Hs biological process
cell communication by electrical coupling Hs biological process
intercalated disc Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
gap junction assembly Hs biological process
cell junction Hs cellular component
paranode region of axon Hs cellular component
ion transmembrane transport Hs biological process
neuronal cell body Hs cellular component
perikaryon Hs cellular component
myelin sheath Hs cellular component
cell development Hs biological process
cardiac muscle tissue development Hs biological process
transmembrane transport Hs biological process
gap junction channel activity involved in SA node cell-atrial cardiac muscle cell electrical coupling Hs molecular function
gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling Hs molecular function
gap junction channel activity involved in cell communication by electrical coupling Hs molecular function
proximal neuron projection Hs cellular component
negative regulation of G1/S transition of mitotic cell cycle Hs biological process
action potential Hs biological process
sensory perception of sound Hs biological process
myelination Hs biological process
protein homodimerization activity Hs molecular function

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ion channel activity Hs molecular function 123 2.77e-31
gap junction channel activity Hs molecular function 123 2.77e-31
protein binding Hs molecular function 108 9.16e-27
endoplasmic reticulum membrane Hs cellular component 123 2.77e-31
plasma membrane Hs cellular component 123 2.77e-31
integral component of plasma membrane Hs cellular component 108 9.16e-27
gap junction Hs cellular component 123 2.77e-31
connexin complex Hs cellular component 123 2.77e-31
cell surface Hs cellular component 108 9.16e-27
intercalated disc Hs cellular component 123 2.77e-31
membrane Hs cellular component 123 2.77e-31
integral component of membrane Hs cellular component 123 2.77e-31
cell junction Hs cellular component 123 2.77e-31
paranode region of axon Hs cellular component 120 5.51e-30
neuronal cell body Hs cellular component 120 5.51e-30
perikaryon Hs cellular component 120 5.51e-30
myelin sheath Hs cellular component 120 5.51e-30
gap junction channel activity involved in SA node cell-atrial cardiac muscle cell electrical coupling Hs molecular function 123 2.77e-31
gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling Hs molecular function 123 2.77e-31
gap junction channel activity involved in cell communication by electrical coupling Hs molecular function 120 5.51e-30
proximal neuron projection Hs cellular component 120 5.51e-30

GO (InterProScan)

2 results

GO Term Analysis Type e-value
connexin complex PANTHER cellular component 1.7E-115
cell communication PANTHER biological process 1.7E-115

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