Aniseed - Gene card

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000006323
NCBI Reference Sequence	NM_001032557.1
NCBI Reference Sequence	XM_009861636.2
NCBI Reference Sequence	XM_018813570.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb1a22

Plate: R1CiGC28b17

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term	Analysis	Definition
ATP_synth_F1_asu	Hamap	ATP synthase, F1 complex, alpha subunit
ATP_synth_F1_asu	PIRSF	ATP synthase, F1 complex, alpha subunit
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
ATPase_F1/V1/A1_a/bsu_N_sf	SUPERFAMILY	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily
ATP_synth_asu_C	Pfam	ATP synthase, alpha subunit, C-terminal
ATP_synth_F1_a	CDD	ATP synthase, F1 complex, alpha subunit nucleotide-binding domain
ATP_synth_asu_C_sf	Gene3D	ATP synthase, alpha subunit, C-terminal domain superfamily
ATPase_a/bsu_AS	ProSitePatterns	ATPase, alpha/beta subunit, nucleotide-binding domain, active site
ATP_synth_asu-like_sf	Gene3D	ATP synthase subunit alpha, N-terminal domain-like superfamily
ATPase_F1/V1/A1_a/bsu_nucl-bd	Pfam	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
ATPase_F1/V1/A1_a/bsu_N	Pfam	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
ATP_synth_F1_asu	TIGRFAM	ATP synthase, F1 complex, alpha subunit

GOSlim

51 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
cytoplasm	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
lysosomal membrane	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Orthology	cellular component
ion transport	Orthology	biological process
endomembrane system	Blast	cellular component
membrane	Orthology	cellular component
integral component of membrane	Blast	cellular component
basolateral plasma membrane	Blast	cellular component
apical plasma membrane	Blast	cellular component
hydrolase activity	Blast	molecular function
adenyl ribonucleotide binding	Orthology	molecular function
melanosome	Blast	cellular component
myelin sheath	Orthology	cellular component
intracellular membrane-bounded organelle	Blast	cellular component
extracellular exosome	Orthology	cellular component
membrane part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
organic substance metabolic process	Orthology	biological process
phosphate-containing compound metabolic process	Orthology	biological process
nuclear part	Orthology	cellular component
transmembrane transport	Orthology	biological process
monovalent inorganic cation transport	Orthology	biological process
nucleoside-triphosphatase activity	Orthology	molecular function
receptor binding	Orthology	molecular function
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
phosphorylation	Orthology	biological process
intracellular transport	Orthology	biological process
intracellular part	Orthology	cellular component
metabolic process	Orthology	biological process
cation transport	Orthology	biological process
cell projection	Blast	cellular component
plasma membrane region	Blast	cellular component
cell leading edge	Blast	cellular component
cytoskeletal part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
synapse part	Blast	cellular component
neuron part	Blast	cellular component
plasma membrane part	Blast	cellular component
vacuolar membrane	Blast	cellular component
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
intracellular organelle part	Blast	cellular component

GO (Orthology)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial proton-transporting ATP synthase complex	Hs	cellular component
mitochondrial matrix	Hs	cellular component
plasma membrane	Hs	cellular component
lipid metabolic process	Hs	biological process
ATP biosynthetic process	Hs	biological process
ion transport	Hs	biological process
COP9 signalosome	Hs	cellular component
ATP synthesis coupled proton transport	Hs	biological process
membrane	Hs	cellular component
ATPase activity	Hs	molecular function
transmembrane transporter activity	Hs	molecular function
adenyl ribonucleotide binding	Hs	molecular function
MHC class I protein binding	Hs	molecular function
cristae formation	Hs	biological process
mitochondrial ATP synthesis coupled proton transport	Hs	biological process
myelin sheath	Hs	cellular component
angiostatin binding	Hs	molecular function
proton-transporting ATP synthase complex	Hs	cellular component
proton-transporting ATP synthase complex, catalytic core F(1)	Hs	cellular component
ATP metabolic process	Hs	biological process
proton-transporting ATP synthase activity, rotational mechanism	Hs	molecular function
extracellular exosome	Hs	cellular component
ATP hydrolysis coupled cation transmembrane transport	Hs	biological process

GO (Blast)

40 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	873	0.0
ruffle	Hs	cellular component	106	1.83e-24
RNA binding	Hs	molecular function	873	0.0
protein binding	Hs	molecular function	873	0.0
ATP binding	Hs	molecular function	873	0.0
cytoplasm	Hs	cellular component	106	1.83e-24
mitochondrion	Hs	cellular component	873	0.0
mitochondrial inner membrane	Hs	cellular component	873	0.0
mitochondrial proton-transporting ATP synthase complex	Hs	cellular component	873	0.0
mitochondrial matrix	Hs	cellular component	873	0.0
lysosomal membrane	Hs	cellular component	106	1.83e-24
cytosol	Hs	cellular component	106	1.83e-24
plasma membrane	Hs	cellular component	873	0.0
microvillus	Hs	cellular component	106	1.83e-24
synaptic vesicle	Hs	cellular component	106	1.88e-24
COP9 signalosome	Hs	cellular component	873	0.0
endomembrane system	Hs	cellular component	106	1.83e-24
hydrogen ion transmembrane transporter activity	Hs	molecular function	106	1.83e-24
membrane	Hs	cellular component	873	0.0
integral component of membrane	Hs	cellular component	106	1.83e-24
basolateral plasma membrane	Hs	cellular component	106	1.88e-24
apical plasma membrane	Hs	cellular component	106	1.88e-24
lateral plasma membrane	Hs	cellular component	106	1.88e-24
vacuolar proton-transporting V-type ATPase complex	Hs	cellular component	106	1.88e-24
hydrolase activity	Hs	molecular function	106	1.83e-24
ATPase activity	Hs	molecular function	873	0.0
transmembrane transporter activity	Hs	molecular function	873	0.0
adenyl ribonucleotide binding	Hs	molecular function	873	0.0
proton-transporting V-type ATPase, V1 domain	Hs	cellular component	106	1.83e-24
MHC class I protein binding	Hs	molecular function	873	0.0
melanosome	Hs	cellular component	106	1.83e-24
myelin sheath	Hs	cellular component	873	0.0
intracellular membrane-bounded organelle	Hs	cellular component	106	1.83e-24
angiostatin binding	Hs	molecular function	873	0.0
proton-transporting ATP synthase complex	Hs	cellular component	873	0.0
proton-transporting ATP synthase complex, catalytic core F(1)	Hs	cellular component	873	0.0
proton-transporting ATP synthase activity, rotational mechanism	Hs	molecular function	873	0.0
proton-transporting ATPase activity, rotational mechanism	Hs	molecular function	106	1.83e-24
extracellular exosome	Hs	cellular component	873	0.0
extrinsic component of synaptic vesicle membrane	Hs	cellular component	106	1.88e-24

GO (InterProScan)

7 results

GO Term	Analysis	Type	e-value
ATP binding	Pfam	molecular function	1.9E-71
ATP synthesis coupled proton transport	Pfam	biological process	8.2E-44
adenyl ribonucleotide binding	CDD	molecular function	0.0
proton-transporting ATP synthase complex, catalytic core F(1)	PIRSF	cellular component	5.9E-275
ATP metabolic process	SUPERFAMILY	biological process	8.11E-28
proton-transporting ATP synthase activity, rotational mechanism	PIRSF	molecular function	5.9E-275
hydrogen ion transmembrane transport	SUPERFAMILY	biological process	8.11E-28

Gene Card

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