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GENE CARD

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  1. Gene 'KH2012:KH.C10.574'

Gene Card

Best human hits

ZBTB24; ZNF226; ZNF441

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001805

Gene Model ID

KH2012:KH.C10.574

Location

KhC10:1827524..1832053

Transcript Models and Sequences

  KH2012:KH.C10.574.v1.A.ND1-1
KH2012:KH.C10.574.v2.A.SL2-1

External Database Gene Card

External database links

4 results

Database Gene ID
ENSEMBL ENSCING00000008254
NCBI Reference Sequence NM_001128905.1
NCBI Reference Sequence XM_018813565.1
NCBI Reference Sequence XM_018813566.1
Collections

Gateway full ORF

2 results

cien103856

Plate: VES86_J14

cien221305

Plate: VES104_L13

Gene collection 1 (N. Satoh)

1 result

cieg033m14

Plate: R1CiGC21c03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

12 results

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
ZF_CCHC_FOG ProSiteProfiles Zinc finger CCHC FOG-type
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

8 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
metal ion binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 64.7 1.20e-10
nucleic acid binding Hs molecular function 64.7 1.12e-10
DNA binding Hs molecular function 64.7 1.12e-10
transcription factor activity, sequence-specific DNA binding Hs molecular function 64.7 1.12e-10
protein binding Hs molecular function 64.7 1.20e-10
intracellular Hs cellular component 64.7 1.12e-10
nucleus Hs cellular component 64.7 1.12e-10
metal ion binding Hs molecular function 64.7 1.12e-10

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.0025

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