Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000009876
NCBI Reference Sequence	XM_002122518.4
NCBI Reference Sequence	XM_018813726.1

Collections

Gene collection 1 (N. Satoh)

1 result

cieg008a11

Plate: R1CiGC16n19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Ankyrin_rpt	SMART	Ankyrin repeat
Ankyrin_rpt-contain_dom	ProSiteProfiles	Ankyrin repeat-containing domain
Ankyrin_rpt-contain_sf	Gene3D	Ankyrin repeat-containing domain superfamily
Ankyrin_rpt	ProSiteProfiles	Ankyrin repeat
Ankyrin_rpt-contain_dom	CDD	Ankyrin repeat-containing domain
Ankyrin_rpt-contain_dom	Pfam	Ankyrin repeat-containing domain
Ankyrin_rpt-contain_sf	SUPERFAMILY	Ankyrin repeat-containing domain superfamily

GOSlim

33 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Blast	biological process
transcription regulatory region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Blast	molecular function
DNA binding	Blast	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
transcription coactivator activity	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
mitochondrion	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
transcription factor binding	Blast	molecular function
midbody	Blast	cellular component
macromolecular complex	Blast	cellular component
identical protein binding	Blast	molecular function
protein homodimerization activity	Blast	molecular function
intracellular membrane-bounded organelle	Blast	cellular component
sequence-specific DNA binding	Blast	molecular function
transcription regulatory region DNA binding	Blast	molecular function
protein heterodimerization activity	Blast	molecular function
perinuclear region of cytoplasm	Blast	cellular component
intracellular part	Blast	cellular component
intracellular organelle part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
cytoskeletal protein binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

37 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transcription regulatory region sequence-specific DNA binding	Hs	molecular function	146	1.45e-35
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	146	1.45e-35
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	128	5.40e-30
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	146	1.45e-35
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	146	1.45e-35
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	128	5.40e-30
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	146	1.45e-35
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	146	1.45e-35
DNA binding	Hs	molecular function	192	4.45e-53
chromatin binding	Hs	molecular function	146	1.45e-35
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	192	4.45e-53
transcription coactivator activity	Hs	molecular function	128	5.40e-30
protein binding	Hs	molecular function	192	4.45e-53
extracellular region	Hs	cellular component	146	1.45e-35
nucleus	Hs	cellular component	192	4.45e-53
nucleoplasm	Hs	cellular component	192	4.45e-53
cytoplasm	Hs	cellular component	192	4.45e-53
mitochondrion	Hs	cellular component	146	1.45e-35
cytosol	Hs	cellular component	192	4.45e-53
plasma membrane	Hs	cellular component	192	4.45e-53
transcription factor binding	Hs	molecular function	192	4.45e-53
midbody	Hs	cellular component	192	4.45e-53
protein binding, bridging	Hs	molecular function	192	4.45e-53
macromolecular complex	Hs	cellular component	192	4.45e-53
Bcl3-Bcl10 complex	Hs	cellular component	192	4.45e-53
I-kappaB/NF-kappaB complex	Hs	cellular component	146	1.45e-35
Bcl3/NF-kappaB2 complex	Hs	cellular component	192	4.45e-53
secretory granule lumen	Hs	cellular component	146	1.45e-35
specific granule lumen	Hs	cellular component	146	1.45e-35
identical protein binding	Hs	molecular function	146	1.45e-35
protein homodimerization activity	Hs	molecular function	146	1.45e-35
actinin binding	Hs	molecular function	146	1.45e-35
intracellular membrane-bounded organelle	Hs	cellular component	192	4.45e-53
sequence-specific DNA binding	Hs	molecular function	146	1.45e-35
transcription regulatory region DNA binding	Hs	molecular function	146	1.45e-35
protein heterodimerization activity	Hs	molecular function	146	1.45e-35
perinuclear region of cytoplasm	Hs	cellular component	192	4.45e-53

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SMART	molecular function	5.3E-7

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences