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GENE CARD

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Gene Card

Best human hits

HMBS

Unique Gene ID

Cirobu.g00001697

Gene Model ID

KH2012:KH.C10.474

Location

KhC10:4855282..4860279

Transcript Models and Sequences

  KH2012:KH.C10.474.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Collections

Gateway full ORF

2 results

cien31714

Plate: VES75_N07

cien149112

Plate: VES93_D15

Gene collection 1 (N. Satoh)

3 results

citb13a1

Plate: R1CiGC30d05

cieg055l12

Plate: R1CiGC24m18

ciht035b22

Plate: R1CiGC44e05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Porphobilinogen_deaminase_C_sf Gene3D Porphobilinogen deaminase, C-terminal domain superfamily
HemC TIGRFAM Porphobilinogen deaminase
Porphobilinogen_deaminase_C Pfam Porphobilinogen deaminase, C-terminal
Porphobilinogen_deaminase_C_sf SUPERFAMILY Porphobilinogen deaminase, C-terminal domain superfamily
HemC PIRSF Porphobilinogen deaminase
HemC Hamap Porphobilinogen deaminase
HemC PANTHER Porphobilinogen deaminase
Porphobilin_deaminase_N Pfam Porphobilinogen deaminase, N-terminal
HemC PRINTS Porphobilinogen deaminase

GOSlim

4 results

GO Term Annotation Origin Type
cytoplasm Orthology cellular component
cytosol Orthology cellular component
transferase activity Orthology molecular function
cellular protein modification process Orthology biological process

GO (Orthology)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
hydroxymethylbilane synthase activity Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
porphyrin-containing compound biosynthetic process Hs biological process
protoporphyrinogen IX biosynthetic process Hs biological process
heme biosynthetic process Hs biological process
transferase activity Hs molecular function
peptidyl-pyrromethane cofactor linkage Hs biological process
tetrapyrrole biosynthetic process Hs biological process

GO (Blast)

4 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
hydroxymethylbilane synthase activity Hs molecular function 372 1.40e-128
cytoplasm Hs cellular component 372 1.40e-128
cytosol Hs cellular component 372 1.40e-128
transferase activity Hs molecular function 372 1.40e-128

GO (InterProScan)

2 results

GO Term Analysis Type e-value
hydroxymethylbilane synthase activity PANTHER molecular function 1.4E-122
tetrapyrrole biosynthetic process PANTHER biological process 1.4E-122