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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...' > 
  2. Gene 'KH2012:KH.C7.173' > 
  3. Gene 'Haaura.CG.MTP2014.S3...' > 

Gene Card

Best human hits

SCAMP1; SCAMP2; SCAMP3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001619

Gene Model ID

KH2012:KH.C10.400

Location

KhC10:3824934..3827885

Transcript Models and Sequences

  KH2012:KH.C10.400.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000010498
NCBI Reference Sequence XM_002127076.4
Collections

Gateway full ORF

2 results

cien188472

Plate: VES99_I11

cien224750

Plate: VES105_O01

Gene collection 1 (N. Satoh)

2 results

cieg022i07

Plate: R1CiGC19a15

cieg045b24

Plate: R1CiGC22d20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
SCAMP PANTHER SCAMP
SCAMP Pfam SCAMP

GOSlim

23 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
endosome Orthology cellular component
Golgi apparatus Orthology cellular component
plasma membrane Orthology cellular component
protein transport Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
ubiquitin protein ligase binding Orthology molecular function
intracellular membrane-bounded organelle Orthology cellular component
synapse Orthology cellular component
extracellular exosome Orthology cellular component
Golgi apparatus part Orthology cellular component
membrane organization Orthology biological process
organelle organization Orthology biological process
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle part Orthology cellular component
organelle membrane Orthology cellular component
whole membrane Orthology cellular component
synapse part Orthology cellular component
bounding membrane of organelle Orthology cellular component
neuron part Orthology cellular component
Golgi membrane Orthology cellular component

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
endosome Hs cellular component
Golgi apparatus Hs cellular component
trans-Golgi network Hs cellular component
plasma membrane Hs cellular component
exocytosis Hs biological process
post-Golgi vesicle-mediated transport Hs biological process
protein transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
transport vesicle Hs cellular component
clathrin-coated vesicle Hs cellular component
cytoplasmic vesicle membrane Hs cellular component
synaptic vesicle membrane Hs cellular component
ubiquitin protein ligase binding Hs molecular function
trans-Golgi network membrane Hs cellular component
specific granule membrane Hs cellular component
zymogen granule membrane Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
synapse Hs cellular component
recycling endosome membrane Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein binding Hs molecular function 298 2.94e-100
endosome Hs cellular component 298 2.94e-100
Golgi apparatus Hs cellular component 298 2.94e-100
trans-Golgi network Hs cellular component 298 2.94e-100
plasma membrane Hs cellular component 298 2.94e-100
membrane Hs cellular component 298 2.94e-100
integral component of membrane Hs cellular component 298 2.94e-100
transport vesicle Hs cellular component 280 7.29e-93
clathrin-coated vesicle Hs cellular component 298 2.94e-100
cytoplasmic vesicle membrane Hs cellular component 298 2.94e-100
synaptic vesicle membrane Hs cellular component 298 2.94e-100
ubiquitin protein ligase binding Hs molecular function 257 1.01e-83
trans-Golgi network membrane Hs cellular component 280 7.29e-93
specific granule membrane Hs cellular component 298 2.94e-100
zymogen granule membrane Hs cellular component 298 2.94e-100
intracellular membrane-bounded organelle Hs cellular component 280 7.29e-93
synapse Hs cellular component 298 2.94e-100
recycling endosome membrane Hs cellular component 298 2.94e-100
extracellular exosome Hs cellular component 280 7.29e-93

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein transport PANTHER biological process 9.2E-118
integral component of membrane PANTHER cellular component 9.2E-118

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