Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000007818
NCBI Reference Sequence	XM_002126435.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl015n11

Plate: R1CiGC10a18

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
Helicase_C	Pfam	Helicase, C-terminal
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
DEAD/DEAH_box_helicase_dom	Pfam	DEAD/DEAH box helicase domain
Helicase_C	SMART	Helicase, C-terminal
RNA_helicase_DEAD_Q_motif	ProSiteProfiles	RNA helicase, DEAD-box type, Q motif
Helicase_C	ProSiteProfiles	Helicase, C-terminal
Helicase_C	CDD	Helicase, C-terminal
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain

GOSlim

41 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Orthology	biological process
mRNA splicing, via spliceosome	Orthology	biological process
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
mRNA processing	Orthology	biological process
translational initiation	Blast	biological process
RNA splicing	Orthology	biological process
regulation of gene expression	Orthology	biological process
negative regulation of gene expression	Orthology	biological process
membrane	Orthology	cellular component
nuclear speck	Orthology	cellular component
hydrolase activity	Orthology	molecular function
neuronal cell body	Orthology	cellular component
perinuclear region of cytoplasm	Blast	cellular component
extracellular exosome	Blast	cellular component
nuclear-transcribed mRNA catabolic process	Orthology	biological process
nucleoside-triphosphatase activity	Orthology	molecular function
nuclear part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
RNA processing	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
organic substance transport	Orthology	biological process
intracellular transport	Orthology	biological process
intracellular protein transport	Orthology	biological process
gene expression	Orthology	biological process
nervous system process	Orthology	biological process
RNA metabolic process	Orthology	biological process
response to organic substance	Orthology	biological process
macromolecular complex binding	Orthology	molecular function
positive regulation of gene expression	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
animal organ development	Orthology	biological process
cytoplasmic part	Blast	cellular component

GO (Orthology)

45 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Hs	biological process
nuclear-transcribed mRNA poly(A) tail shortening	Hs	biological process
mRNA splicing, via spliceosome	Hs	biological process
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
mRNA binding	Hs	molecular function
ATP-dependent RNA helicase activity	Hs	molecular function
helicase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
spliceosomal complex	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
rRNA processing	Hs	biological process
termination of RNA polymerase II transcription	Hs	biological process
mRNA processing	Hs	biological process
RNA export from nucleus	Hs	biological process
mRNA export from nucleus	Hs	biological process
regulation of translation	Hs	biological process
poly(A) binding	Hs	molecular function
associative learning	Hs	biological process
RNA splicing	Hs	biological process
RNA secondary structure unwinding	Hs	biological process
negative regulation of gene expression	Hs	biological process
response to organic cyclic compound	Hs	biological process
membrane	Hs	cellular component
nuclear speck	Hs	cellular component
hydrolase activity	Hs	molecular function
negative regulation of translation	Hs	biological process
dendrite	Hs	cellular component
intracellular ribonucleoprotein complex	Hs	cellular component
mRNA 3'-end processing	Hs	biological process
exon-exon junction complex	Hs	cellular component
selenocysteine insertion sequence binding	Hs	molecular function
RNA stem-loop binding	Hs	molecular function
ribonucleoprotein complex binding	Hs	molecular function
neuronal cell body	Hs	cellular component
positive regulation of translation	Hs	biological process
embryonic cranial skeleton morphogenesis	Hs	biological process
mRNA transport	Hs	biological process
catalytic step 2 spliceosome	Hs	cellular component

GO (Blast)

34 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
nucleotide binding	Hs	molecular function	758
RNA cap binding	Hs	molecular function	523
nucleic acid binding	Hs	molecular function	758
RNA binding	Hs	molecular function	758
double-stranded RNA binding	Hs	molecular function	523
mRNA binding	Hs	molecular function	758
translation initiation factor activity	Hs	molecular function	530
ATP-dependent RNA helicase activity	Hs	molecular function	758
helicase activity	Hs	molecular function	758
protein binding	Hs	molecular function	758
ATP binding	Hs	molecular function	758
nucleus	Hs	cellular component	758
nucleoplasm	Hs	cellular component	758
spliceosomal complex	Hs	cellular component	758
nucleolus	Hs	cellular component	758
cytoplasm	Hs	cellular component	758
cytosol	Hs	cellular component	758
translation factor activity, RNA binding	Hs	molecular function	523
poly(A) binding	Hs	molecular function	758
membrane	Hs	cellular component	758
eukaryotic translation initiation factor 4F complex	Hs	cellular component	530
nuclear speck	Hs	cellular component	758
hydrolase activity	Hs	molecular function	758
ATPase activity	Hs	molecular function	530
dendrite	Hs	cellular component	758
intracellular ribonucleoprotein complex	Hs	cellular component	758
exon-exon junction complex	Hs	cellular component	758
selenocysteine insertion sequence binding	Hs	molecular function	758
RNA stem-loop binding	Hs	molecular function	758
ribonucleoprotein complex binding	Hs	molecular function	758
neuronal cell body	Hs	cellular component	758
perinuclear region of cytoplasm	Hs	cellular component	530
extracellular exosome	Hs	cellular component	523
catalytic step 2 spliceosome	Hs	cellular component	758

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	1.3E-42
ATP binding	Pfam	molecular function	1.3E-42

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cima875725

cima885793

Gene collection 1 (N. Satoh)

cicl015n11

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)